[Feedback] Site Feedback: gene ontology prediction

[Marcela K. Monaco]

Dear Aal-Jan,

Thanks for your e-mail.  We do not plan to include new gene annotations in
our upcoming build but will consider your request for the next one in the
fall.  I will bringing up this for discussion and let you know.

Marcela


On Thu, Jun 19, 2014 at 7:13 AM, feedback at gramene.org <feedback at gramene.org>
wrote:

> URL         : http://www.gramene.org/
>
> Subject     : Site Feedback: gene ontology prediction
>
> Name        : Aalt-Jan van Dijk
>
> Email       : aaltjan.vandijk at wur.nl
>
> Organization: Wageningen University and Research Centre
>
> Comments    :
>
> I'd like to enquire about the possibility to contribute data (in
> particular, gene function predictions) to gramene. Our group has been
> working on gene function prediction in the last few years, previously
> applied a.o. to Arabidopsis (e.g.
> http://www.ncbi.nlm.nih.gov/pubmed/21098674). We are now in the process
> of preparing a revised manuscript for Current Plant Biology (new Elsevier
> journal, http://www.journals.elsevier.com/current-plant-biology/) in
> which we describe application of our method to a.o. rice. Comparison with
> alternative methods such as blast2go indicates significant performance
> improvement. Is there a way in which our predictions could be made
> available via gramene?
> best regards,
> Aalt-Jan van Dijk
> Applied Bioinformatics & Biometris, Wageningen University and Research
> Centre, Wageningen, The Netherlands
>
> http://www.warelab.org/bugs/view.php?id=4974
>
>
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