<div dir="ltr"><div>Dear Aal-Jan,<br><br></div>Thanks for your e-mail. We do not plan to include new gene annotations in our upcoming build but will consider your request for the next one in the fall. I will bringing up this for discussion and let you know.<br>
<br>Marcela<br><br><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Jun 19, 2014 at 7:13 AM, <a href="mailto:feedback@gramene.org">feedback@gramene.org</a> <span dir="ltr"><<a href="mailto:feedback@gramene.org" target="_blank">feedback@gramene.org</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">URL : <a href="http://www.gramene.org/" target="_blank">http://www.gramene.org/</a><br>
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Subject : Site Feedback: gene ontology prediction<br>
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Name : Aalt-Jan van Dijk<br>
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Email : <a href="mailto:aaltjan.vandijk@wur.nl">aaltjan.vandijk@wur.nl</a><br>
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Organization: Wageningen University and Research Centre<br>
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Comments :<br>
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I'd like to enquire about the possibility to contribute data (in particular, gene function predictions) to gramene. Our group has been working on gene function prediction in the last few years, previously applied a.o. to Arabidopsis (e.g. <a href="http://www.ncbi.nlm.nih.gov/pubmed/21098674" target="_blank">http://www.ncbi.nlm.nih.gov/pubmed/21098674</a>). We are now in the process of preparing a revised manuscript for Current Plant Biology (new Elsevier journal, <a href="http://www.journals.elsevier.com/current-plant-biology/" target="_blank">http://www.journals.elsevier.com/current-plant-biology/</a>) in which we describe application of our method to a.o. rice. Comparison with alternative methods such as blast2go indicates significant performance improvement. Is there a way in which our predictions could be made available via gramene?<br>
best regards,<br>
Aalt-Jan van Dijk<br>
Applied Bioinformatics & Biometris, Wageningen University and Research Centre, Wageningen, The Netherlands<br>
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<a href="http://www.warelab.org/bugs/view.php?id=4974" target="_blank">http://www.warelab.org/bugs/view.php?id=4974</a><br>
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