[Sciapps-support] ISSUES WITH SCIAPPS

[AA AA]

Thanks.

On Thu, Feb 25, 2021 at 2:23 PM Wang, Liya <wangli at cshl.edu> wrote:

> Hi Dayo,
>
> The TACC team has discover the issue that the Tapis API failed to retrieve
> the input data from CyVerse Data Store to SciApps. They are trying to
> figure out how this can be resolved.
>
> In the mean time, I was told by my CyVerse friend to make following
> changes to the sci_data folder via icommands before the API issue is
> resolved. I tested it and was able to launch jobs from SciApps.
>
> ichmod -r own ipcservices /iplant/home/YOUR_CYVERSE_USER_NAME/sci_data
>
> Just in case, here is the documentation for icommands:
> https://learning.cyverse.org/projects/data_store_guide/en/latest/step2.html
>
> Regards,
> Liya
>
> On Feb 18, 2021, at 3:06 PM, AA AA <adeyanjuadedayo at gmail.com> wrote:
>
> I am able to load my files but when I submit Jobs, they are failing.
>
> <image.png>
>
> On Thu, Feb 18, 2021 at 2:20 PM AA AA <adeyanjuadedayo at gmail.com<mailto:
> adeyanjuadedayo at gmail.com>> wrote:
> Thanks, it worked.
>
> On Thu, Feb 18, 2021 at 12:28 PM Wang, Liya <wangli at cshl.edu<mailto:
> wangli at cshl.edu>> wrote:
> Hi Dayo,
>
> There was a network issue but it has been fixed. Please try again.
>
> Regards,
> Liya
>
>
> On Feb 18, 2021, at 9:15 AM, AA AA <adeyanjuadedayo at gmail.com<mailto:
> adeyanjuadedayo at gmail.com><mailto:adeyanjuadedayo at gmail.com<mailto:
> adeyanjuadedayo at gmail.com>>> wrote:
>
> <image.png>
>
> It does not load the files
>
>
> On Thu, Feb 18, 2021 at 9:13 AM AA AA <adeyanjuadedayo at gmail.com<mailto:
> adeyanjuadedayo at gmail.com><mailto:adeyanjuadedayo at gmail.com<mailto:
> adeyanjuadedayo at gmail.com>>> wrote:
> Yes I have a scidata folder in cyverse:
> /iplant/home/adedayo/sci_data/SRR2759170_1.fastq.gz
> /iplant/home/adedayo/sci_data/SRR2759170_2.fastq.gz
> I have used it several times. Its not just working now.
> Thanks.
>
> On Thu, Feb 18, 2021 at 8:39 AM Wang, Liya <wangli at cshl.edu<mailto:
> wangli at cshl.edu><mailto:wangli at cshl.edu<mailto:wangli at cshl.edu>>> wrote:
> Hi Dayo,
>
> Do you have a sci_data folder and have you put data in it? You need to
> browse and select the data not paste the data in the form to make it work.
> Here is the instructions for setting up the sci_data folder.
>
> Liya
>
> > On Feb 18, 2021, at 7:03 AM, AA AA <adeyanjuadedayo at gmail.com<mailto:
> adeyanjuadedayo at gmail.com><mailto:adeyanjuadedayo at gmail.com<mailto:
> adeyanjuadedayo at gmail.com>>> wrote:
> >
> > <image.png>
> > Hi,
> > I am having issues with sciapps. I cannot load files and when I copy the
> path to the files and submit the jobs, The jobs always fail. I have a
> screenshot above.
> > Thanks for your anticipated support.
> > Dayo
>
>
>
>
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