Problem with PO files

[Tanya Berardini]

Dear PO folks,

We've run into a problem that is causing our term loader to get confused.

(1) From the po_temporal file:

format-version: 1.0
version: $Revision: 1.31 $
date: 12:04:2007 10:30
saved-by: cwt6
auto-generated-by: DAG-Edit 1.419 rev 3
default-namespace: plant_ontology

[Term]
id: PO:0009012
name: plant growth and development stages
namespace: plant_growth_and_development_stage
def: "The succession of changes leading from the zygote to the mature 
plant. " [Poc:curators ""]
synonym: "Arabidopsis growth" [TAIR:0000205]


(2) From the po_anatomy file:

format-version: 1.0
version: $Revision: 1.43 $
date: 01:05:2007 15:58
saved-by: cwt6
auto-generated-by: DAG-Edit 1.419 rev 3
default-namespace: plant_ontology
subsetdef: Rice "Term used for rice"
subsetdef: Maize "Term used for maize"
subsetdef: Citrus "Term used for citrus"
subsetdef: Tomato "Term used for tomato"
subsetdef: Arabidopsis "Term used for Arabidopsis"
subsetdef: Poaceae "Term used for grasses"
subsetdef: reference "reference plant structure term"

[Term]
id: PO:0009012
name: petiole pulvinus
namespace: plant_structure
def: "Pulvinus of the petiole" [GR:cwt]
is_a: PO:0009000 ! pulvinus
relationship: part_of PO:0020038 ! petiole


Because the same identifier (PO:0009012) is used for two different terms 
in two different ontologies, we are running into errors.


Thanks very much for your help in resolving this.


Tanya

------------------------------------------------------------------------------------------
Tanya Berardini, Ph.D.            tberardi at acoma.stanford.edu
The Arabidopsis Information Resource    FAX: (650) 325-6857
Carnegie Institution of Washington    Tel: (650) 325-1521 ext. 325
Department of Plant Biology        URL: http://arabidopsis.org/
260 Panama St.
Stanford, CA 94305
------------------------------------------------------------------------------------------