Fwd: [Fwd: Re: Rosaceae db and PO collaboration]

[Shuly Avraham]

Begin forwarded message:

> From: Peter Stevens <peter.stevens at mobot.org>
> Date: January 24, 2007 4:48:41 PM EST
> To: po-dev at plantontology.org, Pankaj Jaiswal <pj37 at cornell.edu>
> Subject: Re: [Fwd: Re: Rosaceae db and PO collaboration]
> Reply-To: po-dev at plantontology.org, Peter Stevens  
> <peter.stevens at mobot.org>
>
> Fruit flesh is decidedly vague - perhaps a synonym of mesocarp.   
> But if strawberry, then it has no fruit flesh at all, ditto apple  
> and pear.
>
> P.
>
>
>> Hi Chih-wei,
>>
>> As Sue said in her mail and this one from Angela Baldo, looks like  
>> you need to contact Dorrie Main. I will forward another mail from  
>> Angela in a moment with a contact for grape project. In the  
>> meantime take a look at the link Angela has sent and see if there  
>> are new terms that we need in ontology. Though it is mainly on  
>> phenotypes, a quick look tells that we need some terms like
>> calyx tube
>> calyx lobe
>> fruit flesh
>> fruit lenticel
>>
>> There may be more terms but certainly the STL group would be able  
>> to tell us more on the proper terms for various parts.
>>
>> Pankaj
>>
>> PS: the mail is copied to Dorrie
>>
>> -------- Original Message --------
>> Subject: Re: Rosaceae db and PO collaboration
>> Date: Tue, 23 Jan 2007 20:27:49 -0500
>> From: angela baldo <amb82 at cornell.edu>
>> To: Pankaj Jaiswal <pj37 at cornell.edu>
>> CC: dorrie at wsu.edu
>> References: <45B67B79.9020301 at cornell.edu>
>>
>> Hi Pankaj,
>>
>> Good to hear from you!
>>
>> I'd recommend starting with Dorrie Main, who is the PI in charge  
>> of GDR.
>>  (I've cc'ed Dorrie on this message.)    She would know who in the
>> international community has made progress in this direction, and if
>> there's already a committee charged with something like that.
>>
>> There has been a certain amount of simple morphological  
>> characterization
>> of some of the USDA apple accessions in Geneva; you can see a report,
>> here: http://www.ars-grin.gov/npgs/descriptors/apple
>>
>> Hope this helps,
>>
>> anja
>>
>> Pankaj Jaiswal wrote:
>>> Hi Angela,
>>>
>>> Do you know someone who can work with us on this collaboration.  
>>> We very much appreciate the Rosaceae community to start using the  
>>> PO in their datasets and db. I am sure it will require us to add  
>>> new terms specifically required for Rosaceae community.
>>>
>>> Thanks
>>> Pankaj
>>>
>>> PS: this mail is copied to our new coordinator Chih-wei Tung
>>>
>>> -------- Original Message --------
>>> Subject:	Feedbacks from PAG 2007
>>> Date:	Tue, 23 Jan 2007 15:36:03 -0500
>>> From:	Chih-Wei Tung <cwt6 at cornell.edu>
>>> Reply-To:	po-dev at plantontology.org, Chih-Wei Tung <cwt6 at cornell.edu>
>>> To:	po-dev at plantontology.org
>>>
>>>
>>>
>>> Dear All,
>>>
>>> This is Chih-Wei, I just represented POC to present a poster in  
>>> 2007  PAG meeting last week.
>>> During the time I was in San Diego, several people from Legume  
>>> and Rosaceae research communities expressed their interests on  
>>> applying PO to their projects.  I browsed several public  
>>> databases, such as http://www.bioinfo.wsu.edu/gdr/ and http:// 
>>> lin.ncgr.org/ui/index, currently, they don't have PO implemented  
>>> in it.  By browsing po-dev  mail archives, I know Rex Nelson  
>>> already worked with Katica on  soybean ontology few years ago, I  
>>> am wondering if the similar effort  has been done in Medicago  
>>> community, as well as in Rosaceae communities. If any of you have  
>>> certain research groups in mind who may be interested in using  
>>> PO, please let me know, I'd be happy to contact them as soon as  
>>> possible.
>>>
>>> Chih-Wei
>>>
>>>
>>>
>>> --
>>> Pankaj Jaiswal
>>> G-15, Bradfield Hall
>>> Dept. of Plant Breeding and Genetics
>>> Cornell University
>>> Ithaca, NY-14853, USA
>>>
>>> Ph. +1-607-255-3103 / 4199
>>> fax: +1-607-255-6683
>

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