Query on PO
Shuly
shuly at cshl.edu
Wed Aug 11 01:16:28 EDT 2004
Hi Sergio,
My name is Shuly, and I am responsible for the technical aspect of the
PO database and data uploads.
We are currently using the GO schema and the go-dev package to generate
the schemas and upload PO data into the database..
You can find the go-dev package on the geneontology web site, download
it from SourceForge, or get it in the monthly release of the GO.
I am afraid we don't have the specific PO documentation on that
particular aspect yet, but you can find suitable info on the
geneontology web site:
http://www.godatabase.org/dev/sql/doc/godb-sql-doc.html.
Switching to the chado schema is one of the future directions of GO, but
I am not sure where is stands at the moment.
Shuly.
Gregorio, Sergio (IRRI) wrote:
> To Whom it may concern:
>
> I'd like to follow up an earlier query. I recently downloaded copies
> of your Plant Ontologies. Upon examining your definition and ontology
> structure files, I noticed you have entries (terms) appearing in the
> structure file but not in the definition files. I would like to know
> how this came to be and what you would recommend that I do, if I wish
> to load your data into say, a MySQL database using the Chado schema.
>
> We would certainly appreciate any clarification on the matter. Thank
> you very much!
>
> Regards,
>
> Serge Gregorio packa
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