Query on PO
Katica Ilic
katica at acoma.Stanford.EDU
Mon Aug 9 14:14:13 EDT 2004
Dear Serge,
Thank you for your interest in Plant Ontology. In the most recent revision
of Plant Ontology (anatomy.definition, revision 1.28, and anatomy.ontology,
revision 1.27, buth publicly released on June 23, 2004), all 632
terms have definitions, so if you download these files, it shouldn't be
any problem. Earlier revisions were lacking some definitions, as we were
in the process of building the ontology. Please, let me know if you are
still experiencing problems with the files.
I don't know much about Chado schema right now, I would need to look it
up, so, either I or my colleagues at CSHL (who are in charge of the POC
database) will get back to you soon on this matter.
Best regards,
Katica
On Wed, 4 Aug 2004, Gregorio, Sergio (IRRI) wrote:
> To Whom it may concern:
>
> I'd like to follow up an earlier query. I recently downloaded copies of
> your Plant Ontologies. Upon examining your definition and ontology
> structure files, I noticed you have entries (terms) appearing in the
> structure file but not in the definition files. I would like to know how
> this came to be and what you would recommend that I do, if I wish to load
> your data into say, a MySQL database using the Chado schema.
>
> We would certainly appreciate any clarification on the matter. Thank you
> very much!
>
> Regards,
>
> Serge Gregorio
>
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Katica Ilic katica at acoma.stanford.edu
The Arabidopsis Information Resource Tel: (650) 325-1521 ext. 253
Carnegie Institution of Washington FAX: (650) 325-6857
Department of Plant Biology URL: http://arabidopsis.org/
260 Panama St.
Stanford, CA 94305
U.S.A.
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