Source forge tracking system for POC--Info required
Pankaj Jaiswal
pj37 at cornell.edu
Wed Oct 29 11:16:54 EST 2003
My impression is that we will use sourceforge primarily for the bug tracking
system and doing a mirror of the ontology cvs from Gorgonzola (should be done in
an automated way). Simultaneously, all the ontology files are maintained on
primary cvs on Gorgonzola. The developers should work on these files only.
Pankaj
Sue Rhee wrote:
> On Wed, 29 Oct 2003, Ware, Doreen wrote:
>
>
>>Hi Pankaj,
>>
>>I am not sure if sorceforge is usually used for bug tracking purposes.
>
>
> I know of two projects that are heavily using the bug tracking feature of
> Sorceforge: GO and GMOD.
>
>
>>Shuly is taking care of the documentation. We will use sorceforge as our
>>CVS repository. Shuly will be writting up the documentation. I will reveiw
>>this with her at the end of the week. I do not plan on running a mirror but
>>maintaining one repository structure. If we will be using Source forge then
>>our CVS should be located there.
>
>
> Do you think there should be a backup server, in case Sorceforge is
> temporaily down etc?
>
> Sue
>
>
>>Doreen
>>
>>-----Original Message-----
>>From: Pankaj Jaiswal [mailto:pj37 at cornell.edu]
>>Sent: Wednesday, October 29, 2003 10:26 AM
>>To: po-dev at plantontology.org
>>Subject: Re: Source forge tracking system for POC--Info required
>>
>>
>>Hi Shuly,
>>
>>Wait until I hear from them, in the meantime tell them it's the same group.
>>
>>Here is what I told them in reference to those 2 questions raised by
>>Sourceforge. The following statements were mentioned in the original grant
>>proposal, except that we will use the Sourceforge, which we have now chosen
>>to
>>be an additional mirror site for distribution. Actually, we wanted to have a
>>bug
>>tracking system only, but we need to furnish all these details in order to
>>have it.
>>
>> >
>> > 1. A technical description (at least two paragraphs in
>> > length) of the software you are developing, including the
>> > programming language(s) used in its development and its
>> > major features.
>> >
>>
>>the ontologies will be made available both as flat file DAG-Edit format, and
>>as
>>richer RDF [http:// www.w3.org/RDF/] and DAML-OIL [http://
>>www.w3.org/TR/daml+oil-reference] formats that DAG-Edit and a number of
>>other GO
>>Consortium tools can process. Diagrams used to supplement the text
>>definitions
>>will be downloadable in common archive formats (tar-gzip and zip).
>>Although this project is not primarily directed at software development, any
>>
>>software developed in support of the Plant Ontology Consortium
>>(http://www.plantontology.org) will be available under an open source
>>license.
>>
>>Technical info for source forge -
>>we are using tools developed by the Gene Ontology Project
>>operating system: unix / linux
>>programming language: perl, cgi scripts
>>database: MySQL
>>
>>
>> > 2. Details of the Open Source license (either the name of an
>> > OSI-approved license, or the exact terms of the license if
>> > it is not an OSI-approved license) which will be used by
>> > your project.
>> >
>>
>>All ontologies, associations and software will be released to the public
>>under
>>an open source license that allows free use and distribution
>>(http://www.opensource.org). Releases of ontologies will be made following
>>a
>>quarterly schedule as outlined in the project description. Releases of
>>associations will follow the release schedules of TAIR and Gramene, software
>>
>>will be released as soon as it is judged minimally useable by third parties.
>>The
>>manner and mode of release will be as described in the project description.
>>In accordance with common open source practice, all works will be
>>copyrighted
>>jointly by the members of the Plant Ontology Consortium solely for the
>>purpose
>>of protecting the integrity of the work.
>>
>> >
>>
>>
>>
>
> -----------------------------------------------------------------------------
> Sue Rhee rhee at acoma.stanford.edu
> The Arabidopsis Information Resource URL: www.arabidopsis.org
> Carnegie Institution of Washington FAX: +1-650-325-6857
> Department of Plant Biology Tel: +1-650-325-1521 ext. 251
> 260 Panama St.
> Stanford, CA 94305
> U.S.A.
> -----------------------------------------------------------------------------
>
>
--
******************************************
Pankaj Jaiswal, Ph.D.
Research Associate
Dept. of Plant Breeding
Cornell University
Ithaca, NY-14853, USA
Tel:+1-607-255-3103 / Fax:+1-607-255-6683
E mail: pj37 at cornell.edu
http://www.gramene.org
******************************************
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