[Gramene] Gramene link: Question

Sudhansu Dash sdash at iastate.edu
Fri Nov 20 14:45:35 EST 2009


**Already sent to: helpdesk at ensemblgenomes.org

Hi,
I am the curator of PLEXdb, the Plant and Plant Pathogen gene expression
database (www.plexdb.org) at the Iowa State University.

We have been successfully linking to Gramene from our annotation page for quite
sometime using the following URL:

http://dev.gramene.org/Oryza_sativa/Gene/Summary?db=core;g=LOC_Os01g47410.2|13101.m04889|pr

Now this gives the following error message:

##----------------------------
"Ensembl Server Error

Sorry, an error occurred while the Ensembl server was processing your request

Please email a report , quoting any additional information given below, along
with the URL, to helpdesk at ensemblgenomes.org

The error was:

    unknown (no specific information available)"
##----------------------------

I now realize that the your url in the following formats work:

http://www.gramene.org/Oryza_sativa/Gene/Summary?db=core;g=LOC_Os01g47410.2
http://www.gramene.org/Oryza_sativa/Gene/Summary?g=LOC_Os01g47410.2 


My specific question is: Is it still possible to use
"LOC_Os01g47410.2|13101.m04889|pr" instead of just "LOC_Os01g47410.2" in the
url.  This has practical significance/convenience for us.

I would appreciate your help on this.
In case it is helpful, this is our web page from where we provide the link to
Gramene and others.
http://www.plexdb.org/modules/PD_probeset/annotation.php?array_name=Wheat&sequence_id=Ta.10069.1.S1_at


Sincerely.

Sudhansu Dash, Ph.D.

Curator PLEXdb
www.plexdb.org


------------------------
Sudhansu Dash

1023  Crop Genome Informatics Lab
Iowa State University
Ames, IA  50011


sdash<AT>iastate<DOT>edu












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