[Gramene] Gramene link: Question
Sudhansu Dash
sdash at iastate.edu
Fri Nov 20 14:45:35 EST 2009
**Already sent to: helpdesk at ensemblgenomes.org
Hi,
I am the curator of PLEXdb, the Plant and Plant Pathogen gene expression
database (www.plexdb.org) at the Iowa State University.
We have been successfully linking to Gramene from our annotation page for quite
sometime using the following URL:
http://dev.gramene.org/Oryza_sativa/Gene/Summary?db=core;g=LOC_Os01g47410.2|13101.m04889|pr
Now this gives the following error message:
##----------------------------
"Ensembl Server Error
Sorry, an error occurred while the Ensembl server was processing your request
Please email a report , quoting any additional information given below, along
with the URL, to helpdesk at ensemblgenomes.org
The error was:
unknown (no specific information available)"
##----------------------------
I now realize that the your url in the following formats work:
http://www.gramene.org/Oryza_sativa/Gene/Summary?db=core;g=LOC_Os01g47410.2
http://www.gramene.org/Oryza_sativa/Gene/Summary?g=LOC_Os01g47410.2
My specific question is: Is it still possible to use
"LOC_Os01g47410.2|13101.m04889|pr" instead of just "LOC_Os01g47410.2" in the
url. This has practical significance/convenience for us.
I would appreciate your help on this.
In case it is helpful, this is our web page from where we provide the link to
Gramene and others.
http://www.plexdb.org/modules/PD_probeset/annotation.php?array_name=Wheat&sequence_id=Ta.10069.1.S1_at
Sincerely.
Sudhansu Dash, Ph.D.
Curator PLEXdb
www.plexdb.org
------------------------
Sudhansu Dash
1023 Crop Genome Informatics Lab
Iowa State University
Ames, IA 50011
sdash<AT>iastate<DOT>edu
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