[Gramene] looking for BLAT

Mary Mangan mmangan at openhelix.com
Tue Aug 18 15:38:19 EDT 2009


Hey folks-

 

I'm updating the Gramene tutorial.  We had blastview in the old version, and
I see now that the link at the top says BLAST/BLAT.  But I can't seem to
find BLAT.

 

Am I looking in the right place?  I've been here
http://gramene.org/Multi/blastview and tried some configuration but I can't
seem to locate it, DNA or peptide.

 

BTW: when I clicked the Online Help button from that page I get an error
message at Ensembl.  http://screencast.com/t/qFHqbsnAryq  I can see where
BLAT is at Ensembl if I go directly there.

 

Thanks for any guidance.   If it isn't supposed to be there, that's
fine-I'll just downplay that in the tutorial.  But I don't want to miss it
if I should have it in.

 

Oh: when is the next release scheduled?   Should I be taking screen shots at
this point or should I hold off a bit?  I see in the past September is
possible.

 

Mary

 

 

 

 

 

Mary Mangan, PhD

President

OpenHelix LLC

65 Main St.

Somerville MA 02145

phone: 888-861-5051 x9

email: mmangan at openhelix.com 

blog: www.openhelix.com/blog 

 

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