Presentations at the ASPB meeting
Pankaj Jaiswal
pj37 at cornell.edu
Fri Feb 9 12:07:01 EST 2007
I would go for session 2 (ontology, pathway and ath-genome) before the
one on dbs because we will mention about these thing sin our db talks.
Doing these first will cover a lot of background.
rest is fine. I can do PO ~20 min, Gramene ~40 min and lets say a 5-10
in pathway if we can split.
-pankaj
Christophe Tissier wrote:
> hi Pankaj,
>
> no, there are two sessions. We think that GO deserves more than 20minA
> whole one will be dedicated to GO+PO+ Metabolic pathways.
> There are going to be 4h altogether.
> Session 1 (2h)
> introduction to all the DBs:
> 40min each including whatever question time you see fit for your own DB.
> If you think 40min is too much for your DB, I'm sure we can reallocate
> to time for other things. Do let me know.
>
> Session 2 (2h)
> GO+PO (45-50min)
> Metabolic pathways (30min)
> TAIR genome update (30min)
> Do let me know if you intend to participate in this session (if so
> provide me with an outline of your presentation... couple of lines will
> suffice. Pankaj, do you want to cover PO?).
>
> Now I guess if you intend to talk about the use of GO in your DB intro,
> we could have the session order reversed. Although we can just as well
> mention GO during the talk and introduced the GO talk for those
> interested. I don't think the order is that critical so if you have
> preferences we can definitely consider it.
>
> I hope this clarifies things.
>
> oh, by the way, talking to Wendy (one of the ASPB meeting coordinators),
> this sessions do NOT fall under the Minisymposium category but
> workshops. As such I don't think there is a need for posters. We are
> making arrangement directly with the committee and are bypassing the
> whole abstract submission thing via the web. If you want a separate slot
> for your DB on very specialized topics, you might want to consider
> submitting an abstract under the Botany Format
> <http://www.2007.botanyconference.org/2007Calls/CallforAbstracts2007.pdf>,
> which also does not require a poster. Or contact Wendy to see where you
> presentation would fit best.
>
> If you could all provide me with a very rough dribble on what you intend
> to talk about during the intro session. I need to email Wendy our draft
> by monday, so please send it today or at the latest tomorrow morning.
> Thank you very much.
>
> Christophe
>
> On 2/9/07, Pankaj Jaiswal <pj37 at cornell.edu <mailto:pj37 at cornell.edu>>
> wrote:
>
> Hi Christophe,
>
> I think the 2hr session is shaping up something like this
>
> 20 min-TAIR
> 20 min-SGN
> 20 min-Gramene
> 20 min-Ontologies (GO + PO)--> I suggest adding PO
> 20 min-Plant metabolic pathways
> 20 min-Questions and discussion.
> You can split this 20 min as 5 min after each presentation for
> questions and changeover of the speaker or everything towards
> the end.
>
> -Pankaj
>
> Christophe Tissier wrote:
>
> > Hi Claire,
> >
> > thanks for the emails.
> > MaizeGDB can't make it, so it will be TAIR, SGN and Gramene
> together for
> > the introductory session.
> > As mentioned before, we would hopefully follow up on a second
> session
> > focusing on Gene Ontology and MetaCyc (we will probably introduce
> AraCyc
> > and we could do the same for RiceCyc unless Pankaj wants to do it
> > himself. As for you Lukas, I am not sure whether you want to talk
> about
> > the Cyc you're putting together. It's still in beta, right? not been
> > released to the general public? Overall we think we'll keep the
> MetaCyc
> > part short and sweet).
> > After discussion, I think we're not going to have a third session
> for
> > TAIR. We would squeeze 20min of updates on our new genome release
> in the
> > second session.
> >
> > I have contacted the organizers of the ASPB meeting (I am sorting out
> > the details for rooms etc. Do let me know if you're going to have
> some
> > specific requirements for your presentation other than Powerpoint
> > usuals, laser pointer...). We will need to submit an abstract for
> each
> > session. Although TAIR will fully take care of session 2, it
> would be
> > nice if you could send me a short description of what you want to
> talk
> > about. I will draft an abstract merging all your comments. It
> would be
> > great if you could send me this by tomorrow.
> >
> > Thanks
> >
> > Christophe
> >
> >
> > On 2/8/07, Claire Elise Hebbard <cer17 at cornell.edu
> <mailto:cer17 at cornell.edu>
> > <mailto:cer17 at cornell.edu <mailto:cer17 at cornell.edu>>> wrote:
> >
> > Hi, Christophe,
> >
> > Thanks for initiating this group effort. Yes, Gramene is
> planning to
> > attend, and we are interested in a presentation.
> >
> > Pankaj Jaiswal will be the most likely person to be attending
> and
> > presenting. Ideally, we would also like a one hour slot.
> >
> > I will confirm this with Pankaj and ask him to work on
> submitting an
> > abstract. We would appreciate your working with the
> organizers to
> > try to
> > group the DB presentations together, and for your
> presentation to go
> > first
> > since you will be presenting the GO and Metacyc.
> >
> > You can contact Pankaj ( pj37 at cornell.edu
> <mailto:pj37 at cornell.edu> <mailto:pj37 at cornell.edu
> <mailto:pj37 at cornell.edu>>)
> > or myself directly concerning
> > anything else we should know for this coordination.
> >
> > Sincerely,
> >
> > Claire Hebbard
> > Gramene Outreach
> > cer17 at cornell.edu <mailto:cer17 at cornell.edu>
> <mailto:cer17 at cornell.edu <mailto:cer17 at cornell.edu>>
> >
> >
> >
> > > Hi,
> > >
> > > I am contacting you on behalf of TAIR.
> > > We are planning on going to the ASPB meeting in Chicago
> next July
> > and
> > > wondered whether you had any intentions on attending.
> > > This year, TAIR (Harmut Foerster, Tanya Berardini and
> myself) and SGN
> > > (Lukas
> > > Muller) are planning on a joint session that would introduce
> > several plant
> > > DBs and wondered whether you would be interested in
> sharing a slot.
> > > The idea would be to have a 2h slot to present our
> databases (we're
> > > planning
> > > on maybe four DBs, which would be roughly 30min presentations
> > including
> > > questions).
> > >
> > > TAIR would be happy to run a full session on GO (what its
> purpose
> > is and
> > > its
> > > applications) and probably MetaCyc.
> > > We thought it would make sense to have one DB covering these
> > topics to
> > > avoid
> > > having to repeat the same info everytime.
> > >
> > > Each DB could thereafter have its own, more in-depth session.
> > TAIR would
> > > like to plan on a one hour presentation but we could be
> happy to
> > share a
> > > 2h
> > > slot with another DB. The other two could share another
> (assuming
> > that one
> > > hour is sufficient). In any case, it would probably help
> if we'd
> > > synchronize
> > > our efforts to avoid all having minisymposia at the same
> time and to
> > > maximize exposure.
> > >
> > > If you have not already completed yours, the deadline for
> > submission of
> > > the
> > > minisymposia abstract is february 14th.
> > > Do let me know if this sounds interesting to you and I can
> start
> > > contacting
> > > the ASPB organizers for book some slots and send some
> abstracts.
> > >
> > > Best regards,
> > >
> > > Christophe
> > > --
> > > Dr Christophe Tissier
> MetaCyc:
> > > http://www.metacyc.org/
> > > MetaCyc/TAIR Curator AraCyc:
> > > http://www.arabidopsis.org/tools/aracyc/
> > <http://www.arabidopsis.org/tools/aracyc/>
> > > Carnegie Institution of Washington tel +1
> 650 325
> > 1521
> > > x267
> > > Stanford
> University fax +1
> > 650 325
> > > 6857
> > > Stanford, CA94305
> > > USA
> > >
> >
> >
> >
> >
> >
> > --
> > Dr Christophe Tissier MetaCyc:
> > http://www.metacyc.org/
> > MetaCyc/TAIR Curator AraCyc:
> > http://www.arabidopsis.org/tools/aracyc/
> > Carnegie Institution of Washington tel +1 650 325
> 1521 x267
> > Stanford University fax +1
> 650 325
> > 6857
> > Stanford, CA94305
> > USA
>
>
>
>
> --
> Dr Christophe Tissier MetaCyc:
> http://www.metacyc.org/ <http://www.metacyc.org/>
> MetaCyc/TAIR Curator AraCyc:
> http://www.arabidopsis.org/tools/aracyc/
> Carnegie Institution of Washington tel +1 650 325 1521 x267
> Stanford University fax +1 650 325
> 6857
> Stanford, CA94305
> USA
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