where are these data?
Scott Poethig
spoethig at sas.upenn.edu
Mon Jul 24 08:07:22 EDT 2006
Dear curator,
I have been trying to locate the potential position of a maize gene
of interest (Teopod2) in rice by searching for the position of
sequenced, core maize markers in Gramene. However, when I search for
the closest linked core maize molecular markers, UMC163a and UMC259a,
in Gramene, it does not return any records. Since these markers are
core mapping markers, I must be doing something wrong. How do I find
the position of these markers on the syntenic rice-maize maps?
Also, I have been trying to find the position of rice miRNAs in
Gramene, with no luck. I could do a BLAST search using their
sequences (retrieved from microrna.sanger.ac.uk/cgi-bin/sequences/).
However, I assume that you have annotated miRNAs and I am just
looking in the wrong field. How do I find records for miR156, for
example?
Thanks for your help,
Scott
--
Scott Poethig
Paul Williams Family Professor
Biology Department
University of Pennsylvania
Philadelphia, PA 19104-6018
phone: 215-898-8915
fax: 215-898-8780
email: spoethig at sas.upenn.edu
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