wheat 5DL ESTs

[Dave Matthews]

Hi Dragan,

> This 250 + 180 sequences will be good to sort by blasting to rice pseudo
> molecules.
> Does such tool existing on greengenes or maybe Gramene?

GrainGenes doesn't have a tool for blasting more than one sequence at a
time but it looks like Gramene does.  See
http://www.gramene.org/Multi/blastview
I haven't tried it, let me know how it works.

NCBI has facilities for this too.  See
http://www.ncbi.nlm.nih.gov/blast/blast_FAQs.shtml#Batch

best,
- Dave

> Date: Tue, 31 Jan 2006 18:24:07 +0100
> From: Dragan Perovic <d.perovic at bafz.de>
> 
> Hi Dave,
> 
> thank you for very fast and useful answer.
> I did it already.
> 
> Next tip maybe you know.
> This 250 + 180 sequences will be good to sort by blasting to rice pseudo 
> molecules.
> Does such tool existing on greengenes or maybe Gramene?
> 
> One time more: thank you.
> 
> cheers,
> dragan
> 
> -- 
> Dr. Dragan Perovic
> Bundesanstalt für Zuechtungsforschung an Kulturpflanzen
> Institut für Epidemiologie und Resistenzressourcen
> Theodor-Roemer-Weg 4
> D-06449 Aschersleben
> Tel.: +49 (0)3473 879222
> Fax: +49 (0) 3473 2709
> http://www.bafz.de
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