Gramene Feedback: rice arabidopsis orthologs

[Pankaj Jaiswal]

feedback_submission at www.gramene.org wrote:

>     *** Feedback from the Live Site ***
> 
> refer_to_url: http://www.gramene.org/Arabidopsis_thaliana/
> 
> subject: rice arabidopsis orthologs
> 
> comments: Do you have a list of all rice/arabidopsis orthologs with their respective ids.  If so where can I download it??
> 
> name: Damion
> 
> email: dcn208 at nyu.edu
> 
> organization: NYU
> 
> send_feedback: Send your feedback
> 
> 

Dear Damion,

We suggest using the GrameneMart searches to generate this list.

If you are not familiar with this please follow the tutorials provided 
at http://www.gramene.org/multi/martview to get started. For your 
specific query select the search filters appropriately.


Here is a simplified way using your query.

-Go to http://www.gramene.org/multi/martview
-select the rice data set and click the NEXT button
-don't do anything on next page just click on NEXT button on top. By 
doing this you will be taken to the features section.
-select the Arabidopsis TIGR gene ID  from MULTI SPECIES section
-Scroll down on the same page select the type of output you want
-Click on EXPORT button.
-This should give you the complete list in your desired output format.

I hope this will help and thank you for using the Gramene database

Pankaj
Gramene curator