Question about wheat markers

Jorge Dubcovsky jdubcovsky at ucdavis.edu
Sat May 7 20:27:17 EDT 2005


Dear Gramene collaborator.

I am looking at Gramene genome browser
http://www.gramene.org/Oryza_sativa/contigview?c=5:6579355&w=75455&panel_zoo
m=off

I am particularly interested in the bottom line: the wheat markers.

I would like to know if there is an easy way to retrieve the information of
which wheat chromosome are those wheat markers mapped. 

I assume that if you list them as wheat markers is because they have been
mapped in wheat. Currently I am taking one by one, get the sequence and then
go to GrainGenes, blast the EST database of contigs containing at least one
mapped EST and then getting the information. But this takes a long time if I
need to browse a complete chromosome. Is there an easier way to retrieve the
chromosome arm or chromosome bin location of the wheat marker?

Best regards,

Jorge Dubcovsky
UC Davis




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