Rice SSR markers from EST

[Lim Li Sze]

Dear Dr. McCouch,

Thank you.

Liz

Quoting Susan McCouch <srm4 at cornell.edu>:

> Hi Liz,
>
> In the paper by Temnykh et al. ,(2000) in TAG 100:697-712, you can
> identify the batch we developed from ESTs (noted in the table by the
> GenBank/DDBJ ID number.  There was almost no genomic sequence in those
> days, so when we say we got them from GenBank, it means that almost all
> were from ESTs.
>
> At this point, with all the genome sequence, we do not have an easy way
> of identifying which were derived from EST's in the automated searches,
> and which from genomic sequence.
>
> I hope this is helpful.  Please see
> <http://www.gramene.org/microsat/index/html> to download the files and
> the Temnykh et al. (2000) paper.
>
> Regards,
> Susan
>
>
>
>
>
> On Jul 11, 2005, at 2:05 AM, Lim Li Sze wrote:
>
> >
> > Hi I'm trying to single out rice SSR markers derived from ESTs only.
> Is
> > there any quick way for me to get this information from Gramene?
> > Thanks.
> >
> > Liz
> >
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