[Gmod-help] Re: [Gmod-gbrowse] Gbrowse: "plugin has not been configured"

[Sheldon McKay]

Hi Joseph,

This should be fixed in a fresh svn checkout but...

In the yeast simple conf (yeast_simple.conf), add the word
'FastaDumper' to the 'plugin =' line.
In the yeast complex example (yeast_chr1+2.conf), comment out the
first 'plugin=' line wiht a '#" because it is overriding the correct
option lower in the file.

In general, make sure that the plugin you need is listed in the
'plugin' option in the config file.


----
Sheldon McKay, PhD
Lead, iPlant Tree of Life Engagement Team;
Research Investigator
Cold Spring Harbor Laboratory
http://mckay.cshl.edu
Google Voice:  (203) 701-9204




On Fri, Jan 15, 2010 at 9:05 AM, joseph franklin
<joseph.franklin at yale.edu> wrote:
> Hi,
> I turned on the "plugin_debug" feature, to see if I could get any information about why FastaDumper isn't working when "Dump selection as FASTA" is clicked in the Details selection menu.  I get the following message in the apache2 error log:
>
> ________
> an operation was requested on plugin FastaDumper, but this plugin has not been configured at /usr/local/lib/perl/5.10.0/Bio/Graphics/Browser2/Render.pm line 1318.
> ________
>
> Everything else seems to be working fine, except for that (i'm using the most recent version from SVN).  Any suggestions for fixing it?
>
> thanks-
> Joe
>
>
>
>
>
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