[Gmod-help] Re: [Diyg-pub-l] ISGA GMOD Membership Nomination

[Dave Clements]

Hello all,

This is just a reminder to send any comments on ISGA in the next three days.

Thanks,

Dave C

On Thu, Jul 29, 2010 at 11:07 AM, Dave Clements, GMOD Help Desk <
help at gmod.org> wrote:

> Hello all,
>
> I would like to nominate ISGA for membership in GMOD.  ISGA is a
> bioinformatics pipeline service based on the Ergatis workflow system. ISGA
> comes with prokaryotic annotation and assembly pipelines and offers an
> intuitive interface for biologists to run and customize pipelines. ISGA also
> integrates tools such as GBrowse and BLAST for visualizing and analyzing
> pipeline results. Since ISGA utilizes Ergatis, ISGA pipelines can be
> submitted back to the Ergatis community and Ergatis pipelines can be adapted
> to use ISGA.
>
> ISGA (pronounced "I-S-G-A") was created at Indiana University's Center for
> Genomics and Bioinformatics (CGB) by Chris Hemmerich, Aaron Buechlein, Ram
> Podicheti, Kashi Revanna, and Qunfeng Dong. CGB also hosts a public
> installation of ISGA (see Links below).
>
> I believe that ISGA meets all of GMOD's membership requirements (see
> http://gmod.org/wiki/GMOD_Membership#Requirements).  The CGB is willing to
> support ISGA for at least 2 years.
>
> ISGA could be useful to anyone working with complex pipelines and is
> directly applicable to existing and potential Ergatis users.  This
> nomination is going to the Ergatis and DIYA lists, and to the developers
> of other GMOD components related to computational pipelines.  If you have
> any feedback or comments on ISGA becoming a part of GMOD, please respond
> on list or send mail directly to the help desk, by the end of August 6.
>
> Thanks,
>
> Dave C
>
> ISGA Home Page, Tutorials, and FAQ
>   http://isga.cgb.indiana.edu/
>   http://isga.cgb.indiana.edu/Help/Tutorial
>   http://isga.cgb.indiana.edu/Help/FAQ
> Paper
>   http://bioinformatics.oxfordjournals.org/cgi/content/abstract/26/8/1122
> Posters/Presentations
>   http://gmod.org/wiki/Image:NGSTranscriptomeISGAErgatis.pdf
>   http://gmod.org/wiki/Image:ISGAISMB2010Poster.pdf
>   http://gmod.org/wiki/Image:Jan2010ErgatisForBiologists.pdf
> Ergatis
>   http://gmod.org/wiki/Ergatis
>   http://ergatis.sourceforge.net/
> GMOD Membership Requirements
>   http://gmod.org/wiki/GMOD_Membership#Requirements
>
>
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