[Gmod-help] BAM file

Steve Taylor stephen.taylor at imm.ox.ac.uk
Thu Dec 3 10:51:42 EST 2009


Hi Dave,

Hope you are well!

Don't know if you saw my post, but do you have a test BAM file I could use for hg18? Maybe the one you used in the tutorial...would it make a difference if I use the whole of hg18 as the reference?

So if you could tell me where to get 

 /var/www/gbrowse2/databases/humansam/ex1.bam

from I can at least isolate if it's my gbrowse build or bowtie bam file.

Kind regards and thanks,

Steve
============================================
Head of Computational Biology Research Group
Weatherall Institute of Molecular Medicine
University of Oxford
John Radcliffe Hospital
Headington
Oxford OX3 9DS
+44 1865 222640



More information about the Gmod-help mailing list