[Gmod-gbrowse] [Gmod-help] Re: Configure Gbrowse

[Don Gilbert]

THat data looks like short-read or other sequence snippets, and you
will want first to align to your genome.  THe alignment tool should
give you locations, in GFF v3 or some format you can convert to that.
Some align tools include: BLAT, GMAP, various new short-read aligners.
For a summary of such NGS software look at
http://seqanswers.com/forums/forumdisplay.php?f=18

- Don
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-- d.gilbert--bioinformatics--indiana-u--bloomington-in-47405
-- gilbertd at indiana.edu--http://marmot.bio.indiana.edu/