[Gmod-help] Re: [Gmod-gbrowse] can't view detailed view

[Miquel Ràmia]

I downloaded the files from
ftp://ftp.flybase.net/genomes/Drosophila_melanogaster/current/gff/
(r5.16 was the current few weeks ago)

Here are 2 screenshots, searching both by crhomosome name, the YHet
looks good, and the X shows the "match" screen, any click in the results
(only one in this case) always returns the "match" screen




El dc 29 de 04 del 2009 a les 11:46 -0700, en/na Dave Clements, GMOD
Help Desk va escriure:
> Hi Miquel,
> 
> Can you send screenshots of what it looks like when it working and
> when it isn't?
> 
> Also are the GFF files from
> ftp://ftp.flybase.net/releases/FB2009_04/dmel_r5.17/gff/ ?
> 
> I don't have any explanation for this behavior, yet.
> 
> Thanks,
> 
> Dave C.
> 
> Was this helpful?  Let us know at http://gmod.org/wiki/Help_Desk_Feedback
> 
> Learn more about GMOD at SMBE & Arthropod Genomics:
>  http://ccg.biology.uiowa.edu/smbe/symposia.php?action=view&sym_ID=27
>  http://www.k-state.edu/agc/symp2009/seminar.html
> 
> 
> 2009/4/27 Miquel Ràmia <miquel.ramia at uab.cat>
> >
> > Hi,
> >
> > I'm running Gbrowse 1.69 in a Linux CentOS. I'm trying to upload the
> > D.melanogaster GFF data from flybase to a mysql database. And I have a
> > problem: In some chromosomes , via searching landmark/region by name, I
> > can view de detailed view and tracks, or an overview with the "more than
> > 1.3 Mb not displayed" message; I zoom in and no problem.
> >
> > But with other chromosomes I can only see a "match" r with no zoom
> > option and without detailed view or anything.
> >
> > I tried loading de GFFs chromsome by chromosome (in this order : YHet,
> > U, X, 4, 3R ...). At first I could view the YHet and U details and
> > tracks with no problem, but after loading X data I couldn't view U
> > details but the YHet only. The same with all the chromosomes loaded into
> > the database.
> >
> > Any idea ?
> >
> > Thank you!
> >
> > Miquel Ràmia
> >
> >
> >
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