[Feedback] Site Feedback: orthologs missing [sharon]

[feedback at gramene.org]

URL         : http://ensembl.gramene.org/Oryza_sativa/Gene/Compara_Ortholog?db=core;g=Os11g0523500;r=11:18902070-18907271;t=Os11t0523500-00;tl=94QOA1XYCl0IRXwd-21207-8215117

Subject     : orthologs missing [sharon]

Name        : Pankaj Jaiswal

Email       : jaiswalp at science.oregonstate.edu

Organization: OSU

Comments    : Hi,

I think your HMM-based method is screwing a lot of orthology. I suggest we bring back the reciprocal BLASTP-based methods. Thsi gene had orthologs ion teh previous rounds and not it's all gone.

http://www.warelab.org/bugs/view.php?id=5840