[Feedback] Site Feedback: lack of UTRs

feedback at gramene.org feedback at gramene.org
Mon Sep 12 17:20:19 EDT 2016


URL         : http://ensembl.gramene.org/Zea_mays/Transcript/Variation_Transcript/Image?db=core;g=Zm00001d049201;r=4:20300477-20302033;t=Zm00001d049201_T001

Subject     : Site Feedback: lack of UTRs

Name        : China Lunde

Email       : lundec at berkeley.edu

Organization: UC Berkeley

Comments    : 

Hi:
I am interested in why the annotation for v4 for my goi: Zm00001d049201_T001.1, lacks UTRs? I am trying to make primers. The ATG used for v4 is more conserved w/ orthologs than in v3 but I am wondering how the UTRs will be annotated and when? Maybe this is a consequence of the MakerP predictions? Thanks.

http://www.warelab.org/bugs/view.php?id=5467




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