[Feedback] Site Feedback: Redundant Biomart output

feedback at gramene.org feedback at gramene.org
Tue Oct 27 07:10:55 EDT 2015


URL         : http://ensembl.gramene.org/biomart/martview/de9e5c4a6396d68b25756c5f1b408d34/de9e5c4a6396d68b25756c5f1b408d34

Subject     : Site Feedback: Redundant Biomart output

Name        : Josh Stein

Email       : steinj at cshl.edu

Organization: CSHL

Comments    : 

Hi, I am getting identical lines in the resulting table after choosing gene stable id, GO, and InterPro attributes, which I have not seen previously.  I am aware that asking for multiple attributes results in a combinatorial display of each GO term with each InterPro domain, but I have never before seen complete redundancy in all fields across a row, such as:
Gene stable ID 	GO term accession 	InterPro ID
GRMZM2G052619 	GO:0016021 	IPR008803
GRMZM2G052619 	GO:0016021 	IPR008803
GRMZM2G052619 	GO:0016021 	IPR008803
GRMZM2G052619 	GO:0016021 	IPR027417
GRMZM2G052619 	GO:0016021 	IPR027417
GRMZM2G052619 	GO:0016021 	IPR027417
GRMZM2G052619 	GO:0016021 	IPR030386
GRMZM2G052619 	GO:0005525 	IPR008803
GRMZM2G052619 	GO:0005525 	IPR008803
GRMZM2G052619 	GO:0005525 	IPR008803
GRMZM2G052619 	GO:0005525 	IPR027417
GRMZM2G052619 	GO:0005525 	IPR027417
GRMZM2G052619 	GO:0005525 	IPR027417
GRMZM2G052619 	GO:0005525 	IPR030386
GRMZM2G052619 	GO:0016787 	IPR008803
GRMZM2G052619 	GO:0016787 	IPR008803
GRMZM2G052619 	GO:0016787 	IPR008803
GRMZM2G052619 	GO:0016787 	IPR027417

Josh


http://www.warelab.org/bugs/view.php?id=5280




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