[Feedback] Site Feedback: Gramene Ontology data on ftp site

feedback at gramene.org feedback at gramene.org
Fri Oct 24 13:22:42 EDT 2014


URL         : http://gramene.org/

Subject     : Site Feedback: Gramene Ontology data on ftp site

Name        : Cathy Gresham

Email       : gresham at igbb.msstate.edu

Organization: Mississippi State University Institute for Genomics, Biocomputing and Biotechnology

Comments    : 

I was looking at the ontology go data at 
ftp://ftp.gramene.org/pub/gramene/CURRENT_RELEASE/data/ontology/go

I looked at the release notes from
http://gramene.org/release-notes-42
    It says that the ontology has not been updated since release 31 May - 2010.   

 Does this mean the IEA annotations have not been reviewed | run since that date?  The annotations have an assign date of Aug. 2014.

  I looked at one record and the uniprot_id 2 entrez gene_id mapping seems to be different between the Gramene IEA record and the UniProt website.  This is easily explained if the GO annotations have not been updated since May 2010.

Thanks,
Cathy

http://www.warelab.org/bugs/view.php?id=5053




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