[Feedback] Site Feedback: Regarding GFF3 format

[Marcela K. Monaco]

Dear Sakshi,

I am very sorry for the delay in replying to your query.
Here is a detailed description of the GFF3 format:
http://www.sequenceontology.org/gff3.shtml

You may download genome data for the genomes we host from our FTP
site<ftp://ftp.gramene.org/pub/gramene/CURRENT_RELEASE/data/gff/>or
Plants
Ensembl FTP <ftp://ftp.ensemblgenomes.org/pub/plants/current/gff3/>.

Regards,

Marcela


==
Marcela Karey Monaco, PhD
Gramene Project Coordinator
Cold Spring Harbor Laboratory
One Bungtown Road, Williams #5
Cold Spring Harbor, NY 11724
Phone: 516-367-8808
Fax: 516-367-6851


On Fri, Apr 11, 2014 at 12:36 AM, feedback at gramene.org <feedback at gramene.org
> wrote:

> URL         : http://ensembl.gramene.org/Arabidopsis_thaliana/Info/Index
>
> Subject     : Site Feedback: Regarding GFF3 format
>
> Name        : sakshi bharti
>
> Email       : sakshi.bhartibioinfo at gmail.com
>
> Organization: Punjab Agricultural university
>
> Comments    :
>
> Hello,
>
> I have fasta sequences of my genome of interest i.e. Brassica oleracea But
> I dnt know how to create their GFF3 annotation format. On this site GFF3
> format for various genomes are availabe. Can you please tell me the
> procedure and software to make GFF3 format.
> Looking to your positive reply. I need this information as soon as possible
>
> Regards
>
> http://www.warelab.org/bugs/view.php?id=4923
>
>
> _______________________________________________
> Feedback mailing list
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> http://brie4.cshl.edu/mailman/listinfo/feedback
>
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