<div dir="ltr"><div><div>Dear Sakshi,<br><br></div>I am very sorry for the delay in replying to your query.<br>Here is a detailed description of the GFF3 format: <a href="http://www.sequenceontology.org/gff3.shtml">http://www.sequenceontology.org/gff3.shtml</a><br>
<br></div><div>You may download genome data for the genomes we host from our <a href="ftp://ftp.gramene.org/pub/gramene/CURRENT_RELEASE/data/gff/">FTP site</a> or <a href="ftp://ftp.ensemblgenomes.org/pub/plants/current/gff3/">Plants Ensembl FTP</a>.<br>
<br></div>Regards,<br><br>Marcela<br><div><div><div><br></div><div class="gmail_extra"><br clear="all"><div><span style="border-collapse:collapse;color:rgb(34,34,34);font-family:arial,sans-serif;font-size:13px"><font size="1">==<br>
Marcela Karey Monaco, PhD</font> <font size="1"><br>Gramene Project Coordinator<br>Cold Spring Harbor Laboratory<br>One Bungtown Road, Williams #5<br>Cold Spring Harbor, NY 11724<br></font></span><span style="border-collapse:collapse;color:rgb(34,34,34);font-family:arial,sans-serif;font-size:13px"><font size="1">Phone: <a value="+15163676998" style="color:rgb(17,85,204)"><span>516</span>-<span>367</span>-<span><span style="background-image:initial;background-color:rgb(255,255,204);color:rgb(34,34,34);background-repeat:initial initial"><span><font size="1">8808</font></span></span></span></a><a value="+15163676998" style="color:rgb(17,85,204)"><span></span></a><br>
Fax: <a value="+15163676851" style="color:rgb(17,85,204)"><span>516</span>-<span>367</span>-6851</a></font></span></div>
<br><br><div class="gmail_quote">On Fri, Apr 11, 2014 at 12:36 AM, <a href="mailto:feedback@gramene.org">feedback@gramene.org</a> <span dir="ltr"><<a href="mailto:feedback@gramene.org" target="_blank">feedback@gramene.org</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">URL : <a href="http://ensembl.gramene.org/Arabidopsis_thaliana/Info/Index" target="_blank">http://ensembl.gramene.org/Arabidopsis_thaliana/Info/Index</a><br>
<br>
Subject : Site Feedback: Regarding GFF3 format<br>
<br>
Name : sakshi bharti<br>
<br>
Email : <a href="mailto:sakshi.bhartibioinfo@gmail.com">sakshi.bhartibioinfo@gmail.com</a><br>
<br>
Organization: Punjab Agricultural university<br>
<br>
Comments :<br>
<br>
Hello,<br>
<br>
I have fasta sequences of my genome of interest i.e. Brassica oleracea But I dnt know how to create their GFF3 annotation format. On this site GFF3 format for various genomes are availabe. Can you please tell me the procedure and software to make GFF3 format.<br>
Looking to your positive reply. I need this information as soon as possible<br>
<br>
Regards<br>
<br>
<a href="http://www.warelab.org/bugs/view.php?id=4923" target="_blank">http://www.warelab.org/bugs/view.php?id=4923</a><br>
<br>
<br>
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