making it easier for databases to use the PO

[Katica Ilic]

Sorry for the redundancy, didn't read Shuly's message. She and I have
been thinking the same thing, ftp site. Other files of interest to
the PO users could be placed there too.

Katica

On Tue, 25 Jan 2005, Shuly Avraham wrote:

> Hi Mary,
>
> This kind of list is very easy to generate. If all you need is a flat
> list of terms organized alphabetically, I can generate the list and
> place the file on our (soon to come) FTP site.
> If there are other kinds of requsets or database queries, I can generate
> those as well.
> In addition, in the near future we will have a mysql database dump on
> the ftp site, so you can create a local copy of the database, and query
> it as you need.
>
> Shuly.
>
> Mary Polacco wrote:
>
> >Hi all
> >
> >Is there any reason not to post a list of the PO accessions and the terms,
> >alphabetically - ie no ontology structure?
> >
> >It makes it easier for database folks such as myself both to retrofit, and
> >use the approved terms and their the accession IDs.
> >
> >Attached is a list - from last fall, the CVS dump of terms with accessions
> >and ontology structure, that I used to help map to MaizeGDB. Missing terms,
> >eg synonyms for husk, I mapped using the PO AmiGO browser.  It should be
> >trivial for a regular update of this sort to be dumped from the AmiGO
> >database.
> >
> >  mary
> >
> >
>

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