making it easier for databases to use the PO
Katica Ilic
katica at acoma.Stanford.EDU
Tue Jan 25 12:38:24 EST 2005
Mary,
I like the idea, we can just put it on the ftp site.
Shuly and Doreen, here is another item to discuss for the upcoming
conf call.
Katica
On Tue, 25 Jan 2005, Mary Polacco wrote:
> Hi all
>
> Is there any reason not to post a list of the PO accessions and the terms,
> alphabetically - ie no ontology structure?
>
> It makes it easier for database folks such as myself both to retrofit, and
> use the approved terms and their the accession IDs.
>
> Attached is a list - from last fall, the CVS dump of terms with accessions
> and ontology structure, that I used to help map to MaizeGDB. Missing terms,
> eg synonyms for husk, I mapped using the PO AmiGO browser. It should be
> trivial for a regular update of this sort to be dumped from the AmiGO
> database.
>
> mary
>
>
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