Soybean ontology (PR#24)

Katica Ilic jitterbug at plantontology.org
Wed Sep 1 16:17:01 EDT 2004


Hi Rex,

Great! POC core members have conference call on Sept 09. So next day,
Sept 10 would be good time for a phone call or any other other day after 
Sep 09. Time difference is 2 hours I believe, any time except Tuesday and
Thursday morining 10-12 (PST), when we have regular meetings at TAIR.

Please let me know if this is OK. I hope it's not too 'far-away' date.

Katica

On Wed, 1 Sept 2004 Rex Nelson wrote:

 Katica:
> 
> I talked with Dr. Shoemaker and we are interested in collaborating 
> with the POC on soybean ontologies.  Is there a time I could place a 
> call to you to discuss the collaboration and how this will work?  It 
> will be too cumbersome to do it by Email.
> 
> Please drop me a note on a time that would be convenient for you to 
> take the call.  Please indicate if the time is PDT or not. I am 
> assuming the phone number is: (650) 325-1521 ext. 253.
> 
> Rex
> 
> 
>>Hi Rex,
>>
>>Thanks again for your interest in plant ontologies. It's great that you have
>>plans to create a comprehensive ontology for soybean and other 
>>legumes that will
>>be freely available to the public. I am sure that both, 
>>developmental stages and
>>anatomy/morphology ontologies for soybean will be used by a large number of
>>researchers.
>>
>>Regarding  a help with DAG-edit, I agree with you, it's not very 
>>intuitive tool,
>>but after solving few initial problems, it's relatively easy to edit ontology
>>using this tool. Of course, I'll be happy to help you with tips and 
>>suggestions
>>(I had generous help from my colleagues at TAIR). Please feel free 
>>to contact me
>>any time. To report bugs that you may sometimes discover, especially with new
>>released versions of Dag-edit, please contact John Day-Richter
>>(john.richter at aya.yale.edu).
>>
>>I look forward to hearing from you and Dr. Randy Schoemaker about possibility
>>for collaboration and joining our efforts at POC.
> 
> -- 
> Rex Nelson Ph. D.
> Postdoctoral Fellow
> nelsonrt at iastate.edu
> 
> 
Katica Ilic, TAIR Curator,	     E-mail: katica at acoma.stanford.edu	
The Arabidopsis Information Resource	Tel: (650) 325-1521 ext. 253	
Carnegie Institution of Washington	Fax: (650) 325-6857	
Department of Plant Biology	        URL: http://arabidopsis.org/		
260 Panama St.
Stanford, CA 94305, U.S.A.



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