pls help (PR#46)

[John Day-Richter]

One more thing you might be interested in...

The configuration manager doesn't let you add new types. It merely 
allows you to *assign icons* to types. The icons you specify in the 
configuration manager will never cause a new type to appear in the 
ontology. In fact, you'll never see your icons unless you load an 
ontology that happens to contain a relationship types whose id matches 
one of the ids you entered in the configuration manager.

    -John

AUGUSTINE, ALICE CLARA [AG/8042] wrote:

>Dear Katica,
>Thank you for getting back to me so quickly.
>This has really helped me.
>
>Cheers
>Clare :)
>
>
>-----Original Message-----
>From: Katica Ilic [mailto:jitterbug at plantontology.org] 
>Sent: Wednesday, December 01, 2004 9:08 AM
>To: alice.clara.augustine at monsanto.com
>Cc: po-dev at plantontology.org; john.richter at aya.yale.edu
>Subject: Re: pls help (PR#46)
>
>Hi Alice,
>
>I already forwarded your message to John Richter and am waiting to hear from
>him.
>
>In the meantime, I tried few things in DAG-edit myself, and, contrary to what I
>told you earlier, when I used Advance Option (while saving or loading files), it
>worked, meaning the new relationship type was saved (after I closed DAG-edit).
>However, this relationship type (inverse_of) did not show up under the Edit
>menu, when I scrolled to 'Change relationship type to' (there are only three
>previous relationship types there). Also, adding new relationship types through
>the Configuration Manager did not work at all.
>
>So here is a summary of what worked (using Advanced option window):
>
>In 'Define term relationship symbols' I added NEWTYPE by clicking on 'Add', then
>added Relationship type symbol (I randomly chose &), then below, added
>Relationship type name (which was 'inverse_of'), and in the last box, added
>description (inverse of).
>
>As I said, I am waiting to hear from John and will forward his response to you
>immediately.
>
>Katica
>
>
>  
>
>>Dear Katica,
>>Thank you for getting back to me so quickly.
>>I am using ver 1.418 desktop.
>>Could you go through the steps of adding relationship types using the
>>    
>>
>DAG-edit
>  
>
>>configuration manager (in Plugins). I was not too successful.
>>
>>As an urgent request, could you please find out from any of your colleagues
>>    
>>
>and
>  
>
>>help me out as soon as possible?
>>
>>Thank you
>>Regards
>>Clare
>>PS: I believe Pankaj is on holiday, which is why I have not written to him.
>>I did write to John Richter, but I have not heard from him either (I'm
>>    
>>
>assuming
>  
>
>>he is on a thanksgiving holiday).
>>
>>-----Original Message-----
>>From: Katica Ilic [mailto:jitterbug at plantontology.org] 
>>Sent: Tuesday, November 30, 2004 11:26 PM
>>To: alice.clara.augustine at monsanto.com
>>Cc: po-dev at plantontology.org
>>Subject: Re: pls help (PR#46)
>>
>>Hi Alice,
>>
>>I am not sure I know the exact answer to your question, but I would rather
>>    
>>
>try
>  
>
>>adding the new relationship types in the DAG-edit configuration manager (in
>>Plugins), and not in advanced option. However, adding the Icon path for new
>>realatioship types is more complicated and I would need to ask John Richter
>>about this.
>>
>>Just to make it easier, can you tell me if you are using the most recent
>>    
>>
>version
>  
>
>>of DAG-edit (desktop or Unix) and  also did you download plugins as well
>>(http://sourceforge.net/project/showfiles.php?group_id=36855). 
>>
>>I'll look into this and get back to you soon.
>>
>>Katica
>>
>>    
>>
>>>------_=_NextPart_001_01C4D686.43009590
>>>Content-Type: text/plain
>>>
>>>Dear Katica,             
>>>
>>>I use DAG-Edit version 1.418.
>>>I have problems adding new relationship types.
>>>On your documentation you refer to (Clicking the "Advanced Options" button
>>>allows you to specify the symbol table used to specify relationship types
>>>      
>>>
>>using
>>    
>>
>>>the legacy GO Flat File Format encodings)........I could not find this
>>>      
>>>
>>option.
>>    
>>
>>>I tried doing it via the configuration manager too......but did not have too
>>>much luck.
>>>Could you please guide me?
>>>
>>>Regards
>>>Alice Clare
>>>
>>>------_=_NextPart_001_01C4D686.43009590
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>>>Content-Transfer-Encoding: quoted-printable
>>>
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>>><HEAD>
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>>><TITLE>pls help</TITLE>
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>>><BODY>
>>>
>>><P ALIGN=3DLEFT><FONT SIZE=3D2 FACE=3D"Arial">Dear</FONT> <FONT =
>>>SIZE=3D2 FACE=3D"Arial">Katica</FONT><FONT SIZE=3D2 =
>>>FACE=3D"Arial">,         &n=
>>>bsp;  </FONT> </P>
>>>
>>><P ALIGN=3DLEFT><FONT SIZE=3D2 FACE=3D"Arial">I use DAG-Edit version =
>>>1.418.</FONT></P>
>>>
>>><P ALIGN=3DLEFT><FONT SIZE=3D2 FACE=3D"Arial">I have problems adding =
>>>new relationship types.</FONT></P>
>>>
>>><P ALIGN=3DLEFT><FONT SIZE=3D2 FACE=3D"Arial">On your documentation you =
>>>refer to (</FONT>Clicking the "Advanced Options" button =
>>>allows you to specify the symbol table used to specify relationship =
>>>types using the legacy GO Flat File Format encodings)........I could =
>>>not find this option.</P>
>>>
>>><P ALIGN=3DLEFT>I tried doing it via the configuration manager =
>>>too......but did not have too much luck.</P>
>>>
>>><P ALIGN=3DLEFT>Could you please guide me?</P>
>>>
>>><P ALIGN=3DLEFT>Regards</P>
>>>
>>><P ALIGN=3DLEFT>Alice Clare</P>
>>>
>>></BODY>
>>></HTML>
>>>------_=_NextPart_001_01C4D686.43009590--
>>>
>>>
>>>      
>>>
>>Katica Ilic, TAIR Curator,	     E-mail: katica at acoma.stanford.edu	
>>The Arabidopsis Information Resource	Tel: (650) 325-1521 ext. 253	
>>Carnegie Institution of Washington	Fax: (650) 325-6857	
>>Department of Plant Biology	        URL: http://arabidopsis.org/		
>>260 Panama St.
>>Stanford, CA 94305, U.S.A.
>>
>>    
>>
>
>  
>