DBXrefs

[Katica Ilic]

Hi Pankaj,

I thought we agreed to use PO as the database name, so that every
definition 'created' by POC ontology developers would have PO as
database name. Term ID (which also has PO as prefix) would indicate where
the term came from (by the number range). Is there any reason for doing it
otherwise?

By the way, I did not know about the lower case initials. I have it all in
capital letters (and I also told Leszek to follow the same). Any
particular reason for this? I ma just curious, of course we can always easily change
it, but it seems that most of us have used capital letters so far (though
I am not sure about Felipe).

Katica

On Fri, 16 Apr 2004, Pankaj Jaiswal wrote:

>
>
> Hi Everyone,
>
> Here are the my suggestions for DBxrefs. Please use the consistent style
> by configuring the DBXrefs in your DAG-Edit DBXref library. Try to use
> lower case letters for your initials. Unless you have modified the
> definition available from another source do not add your id in addition to
> the source DBXref. If the definition is completely given by the developer
> based on his/her understanding, then the use of dveloper id DBXref is
> valid.
>
> I hope this will clear up some of the inconsistencies.
>
> Pankaj
>
>
> database name : TAIR
> database id: kl --->for Katica
> description: The Arabidopsis Information resource
>
> Similarly create ids for any other developer from TAIR
>
> database name : MaizeGDB
> database id: lv --->for Leszek
> description: maize Genetics and Genomics Database
>
> create ids for any other developer from MaizeGDB, e.g. mary (mp)
>
> database name : UMSL
> database id: fz --->for Felipe
> description: University of Missouri, St. Louis
>
> create ids for Toby (tk) and Peter (ps)
>
> database name : GR
> database id: pj --->for Pankaj
> description: Gramene Database
>
> database name : ISBN
> database id: 0080374913-->for Plant Anatomy by Fahn A
> description: International Standard Book Numbering
>
> similarly create any other ISBN ids for Essau's etc.
>
>
> database name : AP web Glosssary
> database id: http://www.mobot.org/MOBOT/Research/APweb/top/glossarya_h.html
> description: Angiosperm Phylogeny Website
>
>
>
> database name : Web
> database id: URL --->for any other web resource
> description: Website
>
>
>

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Katica Ilic             		katica at acoma.stanford.edu
The Arabidopsis Information Resource 	Tel: (650) 325-1521 ext. 253
Carnegie Institution of Washington 	FAX: (650) 325-6857
Department of Plant Biology 		URL: http://arabidopsis.org/
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