Synonym file

[Pankaj Jaiswal]

I suggest sticking with the existing format until we start doing things
differently. We can think about it at the time of making the first
release.

Pankaj

Katica Ilic said:
>
>
> ...which means we should be swithcing to OBO sooner rather than later,
> right?
>
> Katica
>
> On Thu, 1 Apr 2004, Pankaj Jaiswal wrote:
>
>> GO did it at the time they were trying to switch over to the new synonym
>> formats to become compatible with the UMLS system. This method is no
>> more
>> required because the new OBO format takes care of it in a very nice
>> format.
>>
>> Managing a separate file is no more required.
>>
>> Pankaj
>>
>> Katica Ilic said:
>> > Pankaj,
>> >
>> > Another question: I noticed that GO has a separate txt file with
>> synonyms,
>> > describing exact type of the synonyms, IDs and relationships. This
>> file is
>> > created manually, and now that GO has switched to OBO, it is no longer
>> > needed.
>> >
>> > How about us at POC, currently we are not using any other type of
>> synonyms
>> > but the exact one (which has a lot of disadvantages). Should we stick
>> to
>> > this till we move on to OBO, or do we need such a file very soon?
>> >
>> > Any thoughts on this?
>> >
>> > Katica
>> > --------------------------------------------------------------------------
>> > Katica Ilic             		katica at acoma.stanford.edu
>> > The Arabidopsis Information Resource 	Tel: (650) 325-1521 ext. 253
>> > Carnegie Institution of Washington 	FAX: (650) 325-6857
>> > Department of Plant Biology 		URL: http://arabidopsis.org/
>> > 260 Panama St.
>> > Stanford, CA 94305
>> > U.S.A.
>> > --------------------------------------------------------------------------
>> >
>> >
>> >
>>
>>
>> --
>> Pankaj Jaiswal
>> Gramene Database
>> www.gramene.org
>>
>
> --------------------------------------------------------------------------
> Katica Ilic             		katica at acoma.stanford.edu
> The Arabidopsis Information Resource 	Tel: (650) 325-1521 ext. 253
> Carnegie Institution of Washington 	FAX: (650) 325-6857
> Department of Plant Biology 		URL: http://arabidopsis.org/
> 260 Panama St.
> Stanford, CA 94305
> U.S.A.
> --------------------------------------------------------------------------
>
>
>


-- 
Pankaj Jaiswal
Gramene Database
www.gramene.org