POC: Tech issues

[Pankaj Jaiswal]

Hi Felipe,

Try with ver. 1.407. There were some known bugs in the program. It was not 
recognizing the relationship types from a flat file. It is fixed now. I have 
also introduced the relationship types comments in my flat files.

I have updated the flat files on CVS. Please do a fresh update before you start.


About executing Dag edit twice, I am going to ask John Richter the program 
developer. In the meantime try installing it twice in 2 different directories. 
It may work.


Pankaj

Felipe Zapata wrote:

> Hi Pankaj,
> 
> Well something weird is happening.  We have to switch to an earlier version of 
> DAG-Edit as the two latest ones did not work properly in MacOS X 10.2 (when one 
> is loading the terms it does not recognize the file path).  Dag Edit 1.405 was 
> working correctly before but now is misbehaving with gremene.anatomy.  When we 
> are loading the terms (we have to load them every time) the following message 
> shows up:
> 
> file:/Users/kellogg/Desktop/sandbox/Poc/anatomy/anatomy_gramene.ontology:10: 
> Unrecognized type character '%plant' found. condition 1
>  %plant anatomy ontology ; GRO:0005297
>  ^
> 
> file:/Users/kellogg/Desktop/sandbox/Poc/anatomy/anatomy_gramene.ontology:11: 
> Unrecognized type character '%whole' found. condition 1
>   %whole plant ; GRO:0005000
>   ^
> 
> file:/Users/kellogg/Desktop/sandbox/Poc/anatomy/anatomy_gramene.ontology:12: 
> Unrecognized type character '%embryo' found. condition 1
>    %embryo ; GRO:0005343 < seed ; GRO:0005339
>    ^
> 
> file:/Users/kellogg/Desktop/sandbox/Poc/anatomy/anatomy_gramene.ontology:13: 
> Unrecognized type character '<basal' found. condition 1
>     <basal cell ; GRO:0000179
>     ^
> 
> file:/Users/kellogg/Desktop/sandbox/Poc/anatomy/anatomy_gramene.ontology:14: 
> Unrecognized type character '<cotyledon' found. condition 1
>     <cotyledon ; GRO:0005358
>     ^
> 
> 5 errors
> 
> What is that??? this was not happening before.... We got the files through CVS 
> and we have them in a folder in desktop.
> 
> On the other hand, DAG Edit cannot be oppened twice in Mac...it seems to be 
> only a PC feature (when I emailed you a couple of weeks ago, it worked in PC, 
> but not in Mac...our lab runs with Mac...maybe we will have to change the 
> roots)
> 
> Hope you can help me with these latest issues.
> 
> Thanks
> 
> Felipe
>