[Gramene] SNP query

[Chitra Raghavan (IRRI)]

Dear Curator,

In my study I have picked significant SNPs as being associated with traits
of interest - say blast disease of rice. In order to know if any QTL for
blast was reported earlier in this location would it be appropriate to use
the SNP query function.

I know the physical position of the SNP marker (pseudomoloecule version 6).
Could I use this information and check if any QTLs were detected in
previous studies by running a SNP query for the trait of interest


http://www.gramene.org/db/diversity/snp_query?species=rice&chr=1&object_name=Blast

In the information you have start and stop position for the QTL I wonder if
this would be based on Pseudomolecule version 6 of Nb

Thanks

Regards
Chitra

-- 
The International Rice Research Institute <http://irri.org> is a member of 
the CGIAR <http://cgiar.org>
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