[Gramene] Plz: regarding help in thesis research for BLB resistance in rice

[Junjian Ni]

Dear vipin kumar singh,

Xa10 has been annotated in our gene db:
http://www.gramene.org/db/genes/search_gene?acc=GR:0061018

via it's link to CMap, you can immediately find some RFLP markers within
the gene region (RZ537, C6, CDO520, RG1109):
http://www.gramene.org/db/cmap/viewer?ref_map_set_acc=cu-sl-2001&label_features=all&ref_map_accs=cu-sl-2001-11&highlight=%22cu-sl-2001-11-ip16%22&ref_map_start=86.5&ref_map_stop=116.4&image_only=0&hide_legend=0&data_source=Gramene

By adding other map sets (rice SSR map, rice sequence map), you could get
the following display:
http://www.gramene.org/db/cmap/viewer?data_source=Gramene;session_id=8a4c8e40cf39be80c421042a7a162d73;step=7;session_mod=start=-1=gt0506-11=18400000;

>From there, You are able to find more SSR markers or other sequence
features within that region.

Hope the info helpful to you and thank you for using Gramene.

Cheers,
Ni

> Dear Sir,
>          I vipin kumar singh,
> am a Ph.D. scholar at
> G.B.Pant University of agri and tech., Pannagar, India.
> Sir I am working on gene pyramiding for BLB resistance
> in Basmati rice using molecular markers. Sir I need your help in this
> regard, as after a long search on the
> internet including your website i got marker data about, the kind of
> molecular marker and sequence for
> Xa-4,5,7,11,13,21,27,29 genes, but i
> am not able to find out the molecular marker for the Xa-10 gene for BLB
> resistance in rice. Therefore i request you to kindly provide me
> the data of kind of molecular marker with its sequence and
> from where i can synthesize that marker for use in my research work, if
> you can
> provide it.
>         I shall be highly thankful for your
> kind
> help to me throughout my life for this exttende and appreciable help from
> you.
> once again i request you to help me please in this regard. sir please help
> me by sending the requested information as early as you can do it.
>  
> information that i need :
> molecular marker for. Xa-10
> gene for Bacterial Leaf blight Resistance in rice Oryza sativa
> kind of
> marker
> sequence of
> marker
> address of supplier/company
> from which i can purchase the marker
>                                                 
>
> regards,
>  
> vipin kumar singh
> Ph.D. scholar
> G.B.Pant University of Agriculture &
> Technology
> Pantnagar, India
>  
> Email Id.: vipin27034 at yahoo.co.in
>               
> vipin27034 at gmail.com            
>   vipin-27034 at rediffmail.com
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Junjian Ni
Gramene Curator
G15, Bradfield Hall,
Cornell University,
Ithaca, NY 14853