genome annotation - combiner algorithms
Tristan Fiedler
fiedler at cshl.edu
Wed Feb 14 16:18:57 EST 2007
Hello All,
nGASP (http://www.wormbase.org/wiki/index.php/NGASP) is currently in
Phase II which is open to combiner algorithms or pipelines utilizing
gene models from other annotation software as input data. A list of
candidate participants is below. To maximize participation in Phase
II, could you please let me know of any additional software packages
which have been omitted.
* Avril's combiner
* DIGIT, T. Takagi
* Ensembl Pipeline
* GeneComber, Francis Ouellette
* GLEAN, Aaron Mackey
* Jigsaw, Jonathan Allen
* Vladimir Pavlovic's pipeline, Vladimir Pavlovic
Thank you,
Tristan
---
Tristan J. Fiedler
Computational Postdoctoral Fellow
Mentor : Professor Lincoln Stein
Cold Spring Harbor Laboratory
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