nuclotide sequence
Junjian Ni
jn66 at cornell.edu
Wed Feb 15 11:08:39 EST 2006
Dear Sanjay,
Our developer, Steve, just reminded me that we actually have two rice gene
records related with "fgr".
http://www.gramene.org/db/mutant/search_mutant?id=GR:0060893
http://www.gramene.org/db/mutant/search_mutant?id=GR:0060894
After checking them, however, I found they are still "under curation".
Based on some files at my hand, the best paper discussing on the fgr
sequence is following:
http://www.blackwell-synergy.com/doi/abs/10.1111/j.1467-7652.2005.00131.x
Unforturnately via Cornell library, I can only access the abstract of the
article. However, from the abstract you still can see the fgr is related
with "betaine aldehyde dehydrogenase".
Using that keyword to do the Gramene generic search, you can find
following protein record:
http://www.gramene.org/db/searches/browser?search_type=All&query=betaine+aldehyde+dehydrogenase&RGN=on
http://www.gramene.org/db/protein/protein_search?protein_id=98555
>From the rice protein page, selecting "Click here to generate a BLASTP
query" will guide you to the following page:
http://www.gramene.org/Multi/blastview/BLA_jW9ZQD9P2
The highest hits for the rice protein sequence are on chro. 8 on which one
of the fgr genes has been originally mapped. Thus, that protein and
related genome positions could be related with "fgr" that you are
interested.
Hope this info helpful to you. Thanks for being interested in using Gramene.
Junjian Ni
Hi Ni,
A search shows that we have two genes with this name:
GR:0060893
GR:0060894
-Steve
> Dear Sanjay,
>
> Please give us more detailed info about the gene you are interested. Then
> we might be able to help you.
>
> Junjian Ni
>
>> dear sir,
>> i am a P.hd.scholar and very keenly interested in fgr gene. Can you
>> provide me the nuclotide sequence of fgr gene?
>> your faithfully
>> sanjay
>>
>
>
> Junjian Ni
> Gramene Curator
> G15, Bradfield Hall,
> Cornell University,
> Ithaca, NY 14853
>
Junjian Ni
Gramene Curator
G15, Bradfield Hall,
Cornell University,
Ithaca, NY 14853
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