exactly matching sequence in rice and arabidopsis

David Marks dmarks at cbs.umn.edu
Fri Sep 10 14:21:12 EDT 2004


Hi folks,

Below is pasted a large block of sequence identified by Kevin 
Silverstein here at the U of MN. This sequence is from Arabidopsis 
chromosome 5 and matches base for base a region on chromosome 10 of 
rice (Rice genome japonica TIGR).

What gives???

David Marks

50761 gtgtgttttg cgacggcaac tagaaattta gtggctgtct tgatatccaa caagaagtag
     50821 cagcatgcat gattatccaa gggaataatc aataatgtat atatagaggc 
tagactgcat
     50881 gtagtcaaat gatgactcct acttgatcat cactactgat gctatggacg 
tatttacttt
     50941 attttctttt ttttacccaa agctatagat gggatctctt tcttttatag 
gtatatgcat
     51001 gttatgccaa tcttgagcag ccattgaagg atgatgttta tagagtatgg 
actgctagtc
     51061 aaatgatgac ttctatgtta ttgtcattgc tgatgttctg gatatattta 
atattttgtt
     51121 tcctagctaa acaataagtg cagtaagaat tataggtaga gccccgcaaa 
aaaaaaaaaa
     51181 gaattatagg tagagaacag ctatagcaag gctctcctat cttatatata 
gaaagaagag
     51241 gtagcaggaa accacatccc ttcttcaacg atggaagtaa gatctttaaa 
tttgtgcttc
     51301 ctcttggttc ttgttttgct tatgagtcca gcgccaacgg caggtgtgtt 
cttactcaac
     51361 tatttttcat aacgttattg gcacacttct gcttttcgct tttcgtgcgt 
tgtcatacat




M. David Marks
Associate Professor
Department of Plant Biology
University of Minnesota
1445 Gortner Ave
St. Paul, MN 55108

(612) 625-6737
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