obtaining sequences

Lincoln Stein lstein at stein.cshl.org
Fri Jun 28 11:42:07 EDT 2002


I support this idea.

Lincoln

On Thursday 27 June 2002 04:09 pm, jde22 at cornell.edu wrote:
> I have an idea for Gramene that I think will be very useful for many
> users.  It would be great if there was a way to download specific
> pieces of sequences by submitting a list of BACs
> (or any other sequences) and regions within those sequences.  So, the
> user would specify the BAC and the beginning and end of the sequences of
> interest and the sequences would be returned, perhaps in FASTA format. 
> This is something that Genbank should do, but doesn't, and most of us spend
> too much time cutting out the sequences that we want.  A batch option would
> also be really great.  I typically write scripts and have a few other
> tricks to do this, but for the typical user, it is a real chore.
>
> Jeremy Edwards

-- 
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Lincoln D. Stein                           Cold Spring Harbor Laboratory
lstein at cshl.org			                  Cold Spring Harbor, NY
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