IRIS linking back to our TO

[Bruskiewich, Richard]

HI Noel,

Thanks for pointing this out... Clearly a bug in our code here. This is a
first generation interface undergoing rapid revision as we speak...
As previously indicated, we're going to eventually synchronize on PO term
ids, within a month or so.

While you're on the line, have you had any further thoughts about our
discussions at PAMG-X?

Cheers
Richard

-----Original Message-----
From: Immanuel Yap [mailto:noelyap at ascus.plbr.cornell.edu]
Sent: Thursday, February 28, 2002 12:12 AM
To: gramene at brie.cshl.org
Cc: Doreen Ware; Zhaow Wei; Susan McCouch; Graham Mclaren; Richard
Bruskiewich
Subject: Re: IRIS linking back to our TO


On Tue Feb 26, 2002, Pankaj Jaiswal wrote:
> 
> Hi Doreen, Wei and Kuan,
> 
> The International rice information system (IRIS) at IRRI, Philippines are
trying
> to link back the trait (TO) terms to us. Its great but, the way they are
linking
> does not return the exact match or the query in our Ontology database.
> 
> I just happend to browse through 
> http://202.164.190.105/iris/showGermData.asp?GID=410238&Study=186
> 
> and figured out that they have the trait terms that link back to us.
> 
> For an example on this page see for trait term "Plant height"
> 
> returns a URL 
> http://www.gramene.org/perl/ontology/search?query=Plant
> height&btn=Ontology+Search
> 
> the results of this query is very generic.
> 
> whereas according to me it should be
> http://www.gramene.org/perl/ontology/search?query=plant+height
> 
> Could you please give a do write-up on how to make links to our Protein
database
> and Ontology database query. 

FTR, the URL given:

http://www.gramene.org/perl/ontology/search?query=Plant
height&btn=Ontology+Search

is all on one line.  Note the space in "Plant height".  This actually
results in a search for "Plant", which you can imagine is extremely
generic.  Replacing the space with a plus sign thus: "Plant+height"
gives the expected results.

Noel
-- 
Immanuel V. Yap <ivy1 at cornell.edu>        | What sets humans apart from 
Department of Plant Breeding and Biometry | other organisms is that they
Cornell University                        | worry about what sets them  
G15 Bradfield Hall, Ithaca, NY 14853      | apart from other organisms. 
office: 1-607-255-3103                    |                - Eric Lander