[Gramene-announce] Gramene database build 46 released
Tello-Ruiz, Marcela
mmonaco at cshl.edu
Tue Jun 30 13:22:59 EDT 2015
The Gramene Team is pleased to announce its release #46. In collaboration with Ensembl Plants<http://plants.ensembl.org> we are providing in this release:
* Updated assembly for tomato<http://gramene.ensembl.org/Solanum_lycopersicum> to v2.50
* New variation data from the Wheat HapMap and and updated genotypes from CerealsDB
* New probe data for barley
* Updated whole genome alignments for Solanum lycopersicum vs Arabidopsis thaliana, Oryza sativa Japonica, and Vitis vinifera
* Peptide comparative genomics data across all species
* Updated cross-references to UniProtKB across all species
* Updated software, genome browser, database schema and API to Ensembl version 80
* Updated gene, sequence and variation BioMarts
A complete description of the contents of this new release is available in our release notes<http://gramene.org/release-notes-46>.
Please let us know<http://tools.gramene.org/feedback> if you have questions or suggestions.
The Gramene Team
--
Marcela Karey Tello-Ruiz, PhD
Cold Spring Harbor Laboratory
Williams Building #5
Cold Spring Harbor, NY 11542
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