[Gramene-announce] Gramene database build 47 released -- announcing the new Plant Reactome

[Tello-Ruiz, Marcela]

Gramene is pleased to announce the release of the new Plant Reactome pathway database website at http://plantreactome.gramene.org.  This milestone is the highlight of Gramene release #47.  New Plant Reactome features include pathway analysis tools for researchers and an intuitive, menu-driven front page with quick links to the pathway browser, search features, and tutorials.  The analysis tools allow researchers to upload gene lists, Uniprot IDs, compound identifiers, and/or -omics expression studies to see their data displayed on the Plant Reactome pathway model along with a pathway enrichment analysis.  Inter-species pathway comparisons and advanced search features are also available.  The Plant Reactome is a database of plant metabolic and regulatory pathways, and currently provides over 200 manually curated Oryza sativa pathways, plus projections to 33 other plant species with
sequenced genomes and transcriptomes.

A complete description of the contents of this new release is available in our release notes (http://gramene.org/release-notes-47).

Please let us know (http://tools.gramene.org/feedback) if you have questions or suggestions.

The Gramene Team


==
Justin Preece
Plant Reactome Coordinator

Marcela Karey Tello-Ruiz, PhD
Gramene Project Coordinator