Apollo is an annotation editor. See <a href="http://gmod.org/wiki/Apollo">http://gmod.org/wiki/Apollo</a><br><br>Dave C.<br><br><div class="gmail_quote">On Fri, Oct 16, 2009 at 12:46 PM, Pankaj Agarwal <span dir="ltr"><<a href="mailto:p.agarwal@duke.edu">p.agarwal@duke.edu</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
<br><font face="sans-serif" size="2">Hi Scott,</font>
<br>
<br><font face="sans-serif" size="2">We may only need to install GBrowse
on Windows.</font>
<br><font face="sans-serif" size="2">Chado has already been installed on
Linux (Ubuntu).</font>
<br><font face="sans-serif" size="2">Sorry, I should have clarified this
earlier to Dave.</font>
<br>
<br><font face="sans-serif" size="2">I am not familiar with Apollo. Is
that something which</font>
<br><font face="sans-serif" size="2">would be used instead of GBrowse, or
is it an installer</font>
<br><font face="sans-serif" size="2">for GBrowse, or something else? </font>
<br>
<br><font face="sans-serif" size="2">Thanks for your help.</font>
<br><div class="im">
<br><font face="sans-serif" size="2">- Pankaj</font>
<br>
<br><font face="sans-serif" size="2">Pankaj Agarwal<br>
Duke Bioinformatics Shared Resource<br>
Duke Comprehensive Cancer Center<br>
Duke University<br>
919-681-6573<br>
<a href="mailto:p.agarwal@duke.edu" target="_blank">p.agarwal@duke.edu</a></font>
<br>
<br>
<br>
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<td width="40%"><font face="sans-serif" size="1"><b>Scott Cain <<a href="mailto:scott@scottcain.net" target="_blank">scott@scottcain.net</a>></b>
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<p><font face="sans-serif" size="1">10/16/2009 03:19 PM</font>
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<div align="right"><font face="sans-serif" size="1">To</font></div>
</td><td><div class="im"><font face="sans-serif" size="1">Dave Clements <<a href="mailto:clements@nescent.org" target="_blank">clements@nescent.org</a>></font>
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<div align="right"><font face="sans-serif" size="1">cc</font></div>
</td><td><font face="sans-serif" size="1">Pankaj Agarwal <<a href="mailto:p.agarwal@duke.edu" target="_blank">p.agarwal@duke.edu</a>>,
GMOD Help Desk <<a href="mailto:help@gmod.org" target="_blank">help@gmod.org</a>></font>
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<div align="right"><font face="sans-serif" size="1">Subject</font></div>
</td><td><font face="sans-serif" size="1">Re: [Gmod-help] Re: GMOD Summer School
Question & Heads Up</font></td></tr></tbody></table>
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<br><font size="3">Hi Pankaj,<br>
<br>
Installing GBrowse on Windows is not terribly hard, and of course, Apollo
is a Java desktop application, so it runs on Windows, but anything else
would be much more difficult. It's not clear to me exactly what you
want to do. If you want Chado on Windows, Dave is right: it should
be theoretically possible, but there will be hiccups along the way, and
it is unlikely that anyone would be able to help.<br>
<br>
Scott<br>
<br>
</font>
<br><font size="3">On Fri, Oct 16, 2009 at 3:03 PM, Dave Clements <</font><a href="mailto:clements@nescent.org" target="_blank"><font color="blue" size="3"><u>clements@nescent.org</u></font></a><font size="3">>
wrote:</font>
<br><font size="3">Hi Pankaj,<br>
<br>
The content from this year's courses is now linked to from the schedules
on the course pages:<br>
</font><a href="http://gmod.org/wiki/2009_GMOD_Summer_School_-_Americas#Program" target="_blank"><font color="blue" size="3"><u>http://gmod.org/wiki/2009_GMOD_Summer_School_-_Americas#Program</u></font></a><font size="3"><br>
</font><a href="http://gmod.org/wiki/2009_GMOD_Summer_School_-_Europe#Program" target="_blank"><font color="blue" size="3"><u>http://gmod.org/wiki/2009_GMOD_Summer_School_-_Europe#Program</u></font></a><font size="3"><br>
<br>
We did not and will not cover installing GMOD components in a Windows environment.
Almost all users use Unix and most of them are Linux. See:<br>
</font><a href="http://gmod.org/wiki/2008_GMOD_Community_Survey#GMOD_Servers" target="_blank"><font color="blue" size="3"><u>http://gmod.org/wiki/2008_GMOD_Community_Survey#GMOD_Servers</u></font></a><font size="3"><br>
<br>
We strongly direct people towards using Linux. If you do use Windows
you'll find that only a small part of the GMOD community can help you when
you have questions.<br>
<br>
Dave C.<br>
</font>
<br><font size="3">On Fri, Oct 16, 2009 at 10:54 AM, Pankaj Agarwal <</font><a href="mailto:p.agarwal@duke.edu" target="_blank"><font color="blue" size="3"><u>p.agarwal@duke.edu</u></font></a><font size="3">>
wrote:</font>
<br><font face="sans-serif" size="2"><br>
Hi Dave,</font><font size="3"> <br>
</font><font face="sans-serif" size="2"><br>
Thanks for the information. I will subscribe to these lists.</font><font size="3">
<br>
</font><font face="sans-serif" size="2"><br>
If it is ok with you, I had a quick question.</font><font size="3"> </font><font face="sans-serif" size="2"><br>
I was wondering if you also cover installation</font><font size="3"> </font><font face="sans-serif" size="2"><br>
of GMOD on Windows environment in the course.</font><font size="3"> </font><font face="sans-serif" size="2"><br>
I would appreciate if you could point me to the course</font><font size="3">
</font><font face="sans-serif" size="2"><br>
materials, then I can look through myself.</font><font size="3"> <br>
</font><font face="sans-serif" size="2"><br>
We are trying to install GMOD on windows and</font><font size="3"> </font><font face="sans-serif" size="2"><br>
were not sure if it would work or there are known</font><font size="3"> </font><font face="sans-serif" size="2"><br>
problems.</font><font size="3"> </font>
<br><font face="sans-serif" size="2"><br>
Thanks,</font><font size="3"> <br>
</font><font face="sans-serif" size="2"><br>
- Pankaj</font><font size="3"> <br>
</font><font face="sans-serif" size="2"><br>
Pankaj Agarwal<br>
Duke Bioinformatics Shared Resource<br>
Duke Comprehensive Cancer Center<br>
Duke University<br>
919-681-6573</font><font color="blue" face="sans-serif" size="2"><u><br>
</u></font><a href="mailto:p.agarwal@duke.edu" target="_blank"><font color="blue" face="sans-serif" size="2"><u>p.agarwal@duke.edu</u></font></a><font size="3">
<br>
<br>
</font>
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<td width="46%"><font face="sans-serif" size="1"><b>Dave Clements <</b></font><a href="mailto:clements@nescent.org" target="_blank"><font color="blue" face="sans-serif" size="1"><b><u>clements@nescent.org</u></b></font></a><font face="sans-serif" size="1"><b>></b>
<br>
Sent by: </font><a href="mailto:clementsnescent@gmail.com" target="_blank"><font color="blue" face="sans-serif" size="1"><u>clementsnescent@gmail.com</u></font></a><font size="3">
</font>
<p><font face="sans-serif" size="1">10/15/2009 03:43 PM</font>
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<div align="right"><font face="sans-serif" size="1">To</font></div>
</td><td width="85%"><font face="sans-serif" size="1">Pankaj Agarwal <</font><a href="mailto:p.agarwal@duke.edu" target="_blank"><font color="blue" face="sans-serif" size="1"><u>p.agarwal@duke.edu</u></font></a><font face="sans-serif" size="1">></font><font size="3">
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<div align="right"><font face="sans-serif" size="1">cc</font></div>
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<div align="right"><font face="sans-serif" size="1">Subject</font></div>
</td><td><font face="sans-serif" size="1">Re: GMOD Summer School Question &
Heads Up</font></td></tr></tbody></table>
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<br>
<br>
Hi Pankaj,<br>
<br>
It will likely open up in February or March. We'll probably hold
the school in May or June this year.<br>
<br>
If you are subscribed to the GMOD news feed or to any of the GMOD mailing
lists, you will see the announcement when it goes out.<br>
<br>
Cheers,<br>
<br>
Dave C.<br>
<br>
On Thu, Oct 15, 2009 at 10:41 AM, Pankaj Agarwal <</font><a href="mailto:p.agarwal@duke.edu" target="_blank"><font color="blue" size="3"><u>p.agarwal@duke.edu</u></font></a><font size="3">>
wrote: </font><font face="sans-serif" size="2"><br>
<br>
Hi Dave,</font><font size="3"> </font><font face="sans-serif" size="2"><br>
<br>
I was writing to find out if you know when the application</font><font size="3">
</font><font face="sans-serif" size="2"><br>
window for next years GMOD Summer school will open.</font><font size="3">
</font><font face="sans-serif" size="2"><br>
I just wanted to make sure I registered in time <br>
for the course next year.</font><font size="3"> </font><font face="sans-serif" size="2"><br>
<br>
Thanks,</font><font size="3"> </font><font face="sans-serif" size="2"><br>
<br>
- Pankaj</font><font size="3"> </font><font face="sans-serif" size="2"><br>
<br>
Pankaj Agarwal<br>
Duke Bioinformatics Shared Resource<br>
Duke Comprehensive Cancer Center<br>
Duke University<br>
919-681-6573</font><font color="blue" size="3"><u><br>
</u></font><a href="mailto:p.agarwal@duke.edu" target="_blank"><font color="blue" face="sans-serif" size="2"><u>p.agarwal@duke.edu</u></font></a><font size="3">
<br>
</font>
<br><font color="#8f8f8f" size="3"><br>
<br>
-- <br>
GMOD News: </font><a href="http://gmod.org/wiki/GMOD_News" target="_blank"><font color="blue" size="3"><u>http://gmod.org/wiki/GMOD_News</u></font></a>
<br><font size="3"><br>
<br>
<br>
-- <br>
------------------------------------------------------------------------<br>
Scott Cain, Ph. D.
scott at
scottcain dot net<br>
GMOD Coordinator (</font><a href="http://gmod.org/" target="_blank"><font color="blue" size="3"><u>http://gmod.org/</u></font></a><font size="3">)
216-392-3087<br>
Ontario Institute for Cancer Research</font>
<br>
</div></div></blockquote></div><br><br clear="all"><br>-- <br>GMOD News: <a href="http://gmod.org/wiki/GMOD_News">http://gmod.org/wiki/GMOD_News</a><br>