[Gmod-help] Installing CHADO for GBROWSE

[Scott Cain]

Hello Josep,

Thanks for the input; I haven't looked at this page in a long time.  I will
add your suggested change, though what I don't understand is that
libdbd-pg-perl is listed as installed via synaptic/apt-get, but then a few
lines later, DBD::Pg is installed via the CPAN shell.  I don't understand
why that was done, unless it was to get a newer version of DBD::Pg than was
installed by apt-get.  In any event, having the Pg dev package installed is
not a bad thing.

Thanks,
Scott


On Mon, Oct 10, 2011 at 12:41 PM, Josep F Abril <jabril at ub.edu> wrote:

> Dear,
>
> on the web page tutorial at:
>
>  http://gmod.org/wiki/**Installing_Chado_on_Ubuntu_**HOWTO<http://gmod.org/wiki/Installing_Chado_on_Ubuntu_HOWTO>
>
> there is a package prerequisite that is missing, "libpq-dev". In fact, it
> contains "pg_config", which is needed to install DBD::Pg on cpan shell). On
> the following forum:
>
>  http://ubuntuforums.org/**showthread.php?t=1341411<http://ubuntuforums.org/showthread.php?t=1341411>
>
> they commented that:
>
>  /usr/bin/pg_config is in the package libpq-dev
>
> Which has worked, at least on my server. Just if you were not aware of
> that, and if you can update the corresponding page on the wiki tutorial.
>
> Thanks for your help... Josep F.
>
> ---->8---->8---->8---->8---->**8---->8---->8---->8---->8----
>            Josep Francesc ABRIL FERRANDO, PhD
>  COMPUTATIONAL GENOMICS LAB @ GENETICS DEPARTMENT / IBUB
>     FACULTAT de BIOLOGIA - UNIVERSITAT de BARCELONA
>  Av Diagonal, 645 - 08028 - Barcelona - Catalonia - SPAIN
>  Ph: +34 93 4031305 / Fax: +34 93 4034420 / jabril at ub.edu
>  **************  http://compgen.bio.ub.es  **************
>  *************  http://planarian.bio.ub.es  *************
>  ***************  http://europlannet.org  ***************
> ----8<----8<----8<----8<----8<**----8<----8<----8<----8<----
>



-- 
------------------------------------------------------------------------
Scott Cain, Ph. D.                                   scott at scottcain dot
net
GMOD Coordinator (http://gmod.org/)                     216-392-3087
Ontario Institute for Cancer Research
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://brie4.cshl.edu/pipermail/gmod-help/attachments/20111011/972d1667/attachment.html>