[Gmod-help] about chado

Marcelo Goncalves Narciso (Pesquisador) narciso at cnpaf.embrapa.br
Fri Oct 29 11:29:20 EDT 2010


Hi people, 
good morning.

I need to send data from rice SNPs (.gff3 file) and
I try the command

 sudo /usr/local/bin/gmod_bulk_load_gff3.pl --dbname chadodb --dbuser uuu 
--dbpass xxxx --dbhost localhost --organism  --gff riceVariety.gff3

I would like to know if I have download archives .gbk from
NCBI about OryzaSativa and transform it in .gff3 and load in the
bank.

How to send data from SNP and rice to chado and how I 
use Gbrowser with chado is my question.

Thank you.

Marcelo.
--
Embrapa Arroz e Feijao (http://www.cnpaf.embrapa.br)




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