[Gmod-help] MOLGENIS

Dave Clements clements at nescent.org
Thu May 13 19:29:01 EDT 2010


Dear Morris,

I meant to give you a thoughtful response this week, but time has been hard
to come by for the past several days.  (We just finished the 2010 GMOD
Summer School and your email arrived while I was traveling.)

The requirements for GMOD software are described on the
http://gmod.org/wiki/GMOD_Membership page.  Can you take a look at those and
let me know if you think MOLGENIS meets the requirements?  That page also
describes the process of becoming part of GMOD.

I'll take a closer look at MOLGENIS and then (hopefully!) give you a
thoughtful response to this proposal.  If we still think we are a good match
then we'll start the nominating process.

I just read the XGAP paper last week (while flying to the summer school).

I'm taking tomorrow (Friday) off.  I'll try to send you a response by the
middle of next week.

Thanks for your interest,

Dave C.



On Tue, May 11, 2010 at 7:43 AM, Morris Swertz <m.a.swertz at rug.nl> wrote:

> Dear GMOD team,
>
> First, compliments on the great work with GMOD. Secondly I want to propose
> adding our MOLGENIS project to the GMOD family. In particular because we now
> embarked on animaldb, a project to manage experiments on model organisms, as
> well as various genotype/phenotype efforts that overlap with GMOD
> activities. Also we noticed GMOD expanding with the inclusion of affiliated
> infrastructures like BioMART and Galaxy. We would like to make sure our
> activities converge.
>
> Background: In the five-odd years we have developed a powerful database
> generator software named MOLGENIS that generates web applications plus user,
> R, Java, SOAP, REST, RDF and tab delimited exchange format. This formaly has
> proven an excellent platform to rapidly prototype custom web applications
> for life science experiments. With more and more users spread over the world
> we would be delighted to make our work part of the GMOD network which we
> think is a great way to make sure projects work together. Currently we are
> about 10 developers as well as partners distributed over mainly Europe which
> allows us to provide GMOD levels of support and help. We are preparing to
> integrate into GMOD components and models so bind our communities together.
> See attachement of our BOSC abstract for some more info.
>
> Hoping for a positive response we have proactively added some more
> information to http://gmod.org/wiki/MolGenIS
> Being a newcomer in GMOD not knowing ettiquette, thus we've not yet added
> to the Database Tools section http://gmod.org/wiki/GMOD_Components
>
> Kind regards,
> Morris Swertz
>
> http://www.molgenis.org
> http://tinyurl.com/swertz-at-ebi
> http://tinyurl.com/swertz-at-umcg
>
>
>
>


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