[Gmod-help] a Little problem =D

[Scott Cain]

Hi Fernando,

There is not a term in the Sequence Ontology for pseudopromoter, and
it isn't clear to me what you should use instead.  Where did the GFF
come from?  Perhaps you could ask the originator what term should be
used instead, or you could ask on the Sequence Ontology mailing list:
song-devel at lists.sourceforge.net.

Scott


On Wed, Jun 2, 2010 at 2:01 PM, fernando bueno <stradlinbueno at gmail.com> wrote:
> Hi
>
> I have found this error while inserting a gff in chado
>
> MSG: no cvterm for pseudopromoter
> STACK: Error::throw
> STACK: Bio::Root::Root::throw
> /usr/local/share/perl/5.10.1/Bio/Root/Root.pm:368
> STACK: Bio::GMOD::DB::Adapter::get_type
> /usr/local/share/perl/5.10.1/Bio/GMOD/DB/Adapter.pm:4353
> STACK: /usr/local/bin/gmod_bulk_load_gff3.pl:808
>
>
> can you help me????
>
> Thank you
>
>
> Fernando Bueno
>



-- 
------------------------------------------------------------------------
Scott Cain, Ph. D.                                   scott at scottcain dot net
GMOD Coordinator (http://gmod.org/)                     216-392-3087
Ontario Institute for Cancer Research