[Gmod-help] Re: [Gmod-gbrowse] Need some help - submitting TopoView RNA-seq stuff to GMOD

Victor Strelets Strelets at aardwolf.bio.indiana.edu
Wed Jul 28 15:06:41 EDT 2010


On Wednesday July 28 2010 12:48 pm, Dave Clements, GMOD Help Desk wrote:
> Have you got any response to this question?  If not, I can feature it on
> the GMOD website to draw more attention to it.  There are indeed a lot of
> users out there who could use this.

No Dave, not a single one..

Go ahead with your idea about GMOD site.

Alternative will be me re-writing data conversion
script into something simpler, to handle just one (!) 
flavor of cov/wig file and supplying detailed description 
(and sample) of the resulting file format and then submitting 
that + glyph to guys you for distribution. With a warning that
users apply that conversion script at their own risk and should 
be ready to adjust its code to handle format variations, if necessary.
This is because glyph itself and its config  control  both work
just fine already, and the only problem is in data conversion
script handling multiple flavors of cov/wig format. 

Victor




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