[Gmod-help] GBrowse 1.9... Issue

[A Naqvi]

Hi,

Yes it did, but I am having similar issues when I try to add NGS data to it.
I followed the tutorial and it has issues (also takes awhile to load).

thanks,
Ammar

On Fri, Feb 5, 2010 at 6:40 PM, Dave Clements, GMOD Help Desk <help at gmod.org
> wrote:

> Hi Ammar,
>
> Did Fabian's suggestion solve this problem?
>
> Thanks,
>
> Dave C.
>
> On Wed, Feb 3, 2010 at 1:14 PM, A Naqvi <naqvia at gmail.com> wrote:
> > Hi,
> >
> > My name is Ammar Naqvi and I work at the Memorial Sloan-Kettering
> > Cancer Center. I have installed and configured the GBrowse 1.9971 on
> > my local machine (Ubuntu). The example and demo databases are working
> fine.
> > I have added and configured the browser for the Drosophila genome. I
> > followed the instructions exactly on the GMOD wiki page. It is almost
> > working properly, meaning it displays the graphics, the features and
> > so forth, but for few of the chromosomes (ie. 2L:6663965..6674790) the
> > glyphs are not displaying, but it does say  "The following 5 regions
> > match your request." on top. It also can show the actual sequence when
> > you click on text as output in the "Configure..." option. However,
> > when you type in a gene name, such as "cup" on the search it displays
> > the graphics and features even though its found on the chromosome. I
> > re-checked the mysql database and all of these chromosomes are present
> > and I don't see anything wrong with them. If you can assist me in
> > solving this issue, that would be greatly appreciated.
> >
> > Thanks,
> > Ammar Naqvi
> >
>
>
>
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